C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007KX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
TNPO1 UCNEbase 9606 5:72908703-73338640
GeneTranscriptPositionBiotype
ENSG00000083312 (TNPO1)
transportin 1 		ENST00000337273 (TNPO1-001) 72816312-72916733 protein_coding
ENST00000503084 (TNPO1-005) 72900874-72908913 retained_intron
ENST00000505082 (TNPO1-004) 72872668-72887210 processed_transcript
ENST00000506351 (TNPO1-006) 72848184-72908951 protein_coding
ENST00000506528 (TNPO1-008) 72848385-72872720 processed_transcript
ENST00000508762 (TNPO1-003) 72871747-72883099 processed_transcript
ENST00000509030 (TNPO1-007) 72848385-72862396 processed_transcript
ENST00000511754 (TNPO1-009) 72848385-72865731 processed_transcript
ENST00000513944 (TNPO1-002) 72848170-72861915 processed_transcript
ENST00000515483 (TNPO1-010) 72816624-72855916 processed_transcript
ENST00000518279 (TNPO1-012) 72816793-72865693 processed_transcript
ENST00000520850 (TNPO1-011) 72816649-72883097 nonsense_mediated_decay
ENST00000523768 (TNPO1-013) 72816672-72905429 protein_coding
ENST00000605210 (TNPO1-014) 72893676-72905580 protein_coding
ENSG00000157107 (FCHO2)
FCH domain only 2 		ENST00000287761 (FCHO2-002) 72956071-73038123 protein_coding
ENST00000430046 (FCHO2-001) 72955981-73090522 protein_coding
ENST00000503302 (FCHO2-005) 73051100-73052856 retained_intron
ENST00000507345 (FCHO2-007) 72956066-73017282 protein_coding
ENST00000508431 (FCHO2-004) 73058421-73077440 retained_intron
ENST00000511264 (FCHO2-003) 73034468-73037192 retained_intron
ENST00000512348 (FCHO2-006) 72956069-73088428 protein_coding
ENSG00000157111 (TMEM171)
transmembrane protein 171 		ENST00000287773 (TMEM171-002) 73120569-73131809 protein_coding
ENST00000454765 (TMEM171-001) 73120292-73131817 protein_coding
ENSG00000164325 (TMEM174)
transmembrane protein 174 		ENST00000296776 (TMEM174-001) 73173195-73175143 protein_coding
ENST00000511737 (TMEM174-002) 73173292-73175058 processed_transcript
ENSG00000248930 (CTC-250P20.1)
 ENST00000502452 (CTC-250P20.1-001) 73020700-73021279 processed_pseudogene
ENSG00000249743 (RP11-60A8.1)
 ENST00000427584 (RP11-60A8.1-003) 73213982-73244820 lincRNA
ENST00000503403 (RP11-60A8.1-004) 73291590-73294934 lincRNA
ENST00000513280 (RP11-60A8.1-002) 73291936-73294922 lincRNA
ENST00000513379 (RP11-60A8.1-001) 73213954-73294930 lincRNA
ENST00000515556 (RP11-60A8.1-005) 73213947-73288839 lincRNA
ENSG00000250747 (RP11-232L2.1)
 ENST00000512837 (RP11-232L2.1-001) 73152416-73152938 processed_pseudogene
ENSG00000251467 (CTC-250P20.2)
 ENST00000506083 (CTC-250P20.2-001) 72996920-72997642 processed_pseudogene
ENSG00000251543 (RP11-60A8.2)
 ENST00000511174 (RP11-60A8.2-001) 73337906-73338533 lincRNA
ENSG00000251599 (RP11-232L2.2)
 ENST00000508255 (RP11-232L2.2-001) 73132008-73150592 antisense
ENSG00000271926 (CTD-2376I4.1)
 ENST00000607027 (CTD-2376I4.1-001) 72953635-72954274 lincRNA
ENSG00000272081 (CTD-2376I4.2)
 ENST00000606587 (CTD-2376I4.2-001) 72955206-72955699 lincRNA
CIL_0007KX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
TNPO1 UCNEbase 10090 13:98476724-98844627
GeneTranscriptPositionBiotype
ENSMUSG00000009470 (Tnpo1)
transportin 1 		ENSMUST00000109399 (Tnpo1-002) 98839019-98891040 protein_coding
ENSMUST00000109401 (Tnpo1-001) 98839019-98926384 protein_coding
ENSMUST00000179271 (Tnpo1-004) 98875642-98891014 protein_coding
ENSMUST00000179301 (Tnpo1-003) 98849223-98890998 protein_coding
ENSMUSG00000041685 (Fcho2)
FCH domain only 2 		ENSMUST00000040340 (Fcho2-201) 98723407-98815449 protein_coding
ENSMUST00000099277 (Fcho2-202) 98723407-98815449 protein_coding
ENSMUST00000109403 (Fcho2-203) 98753840-98815449 protein_coding
ENSMUST00000179563 (Fcho2-204) 98751872-98815449 protein_coding
ENSMUSG00000046082 (Tmem174)
transmembrane protein 174 		ENSMUST00000050389 (Tmem174-201) 98634978-98637410 protein_coding
ENSMUSG00000052485 (Tmem171)
transmembrane protein 171 		ENSMUST00000064347 (Tmem171-001) 98686235-98694834 protein_coding
ENSMUST00000148950 (Tmem171-002) 98692314-98694768 protein_coding
ENSMUSG00000092116 (Gm10320)
predicted pseudogene 10320 		ENSMUST00000170205 (Gm10320-001) 98489348-98492001 protein_coding
CIL_0007KX_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
TNPO1 UCNEbase 7955 5:36658095-36823076
GeneTranscriptPositionBiotype
ENSDARG00000035388 (tmem174)
transmembrane protein 174 		ENSDART00000051297 (tmem174-201) 36722998-36724869 protein_coding
ENSDARG00000035389 (fcho2)
FCH domain only 2 		ENSDART00000051271 (fcho2-201) 36743690-36818581 protein_coding
ENSDART00000139673 (fcho2-001) 36741560-36779775 protein_coding
ENSDART00000141218 (fcho2-002) 36741560-36755263 protein_coding
ENSDART00000144105 (fcho2-003) 36763397-36777277 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007KX_0001ENSG00000083312ENST00000337273ENST00000503084ENST00000505082ENST00000506351ENST00000506528ENST00000508762ENST00000509030ENST00000511754ENST00000513944ENST00000515483ENST00000518279ENST00000520850ENST00000523768ENST00000605210ENSG00000157107ENST00000287761ENST00000430046ENST00000503302ENST00000507345ENST00000508431ENST00000511264ENST00000512348ENSG00000157111ENST00000287773ENST00000454765ENSG00000164325ENST00000296776ENST00000511737ENSG00000248930ENST00000502452ENSG00000249743ENST00000427584ENST00000503403ENST00000513280ENST00000513379ENST00000515556ENSG00000250747ENST00000512837ENSG00000251467ENST00000506083ENSG00000251543ENST00000511174ENSG00000251599ENST00000508255ENSG00000271926ENST00000607027ENSG00000272081ENST00000606587CIL_0007KX_0002ENSMUSG00000009470ENSMUST00000109399ENSMUST00000109401ENSMUST00000179271ENSMUST00000179301ENSMUSG00000041685ENSMUST00000040340ENSMUST00000099277ENSMUST00000109403ENSMUST00000179563ENSMUSG00000046082ENSMUST00000050389ENSMUSG00000052485ENSMUST00000064347ENSMUST00000148950ENSMUSG00000092116ENSMUST00000170205CIL_0007KX_0003ENSDARG00000035388ENSDART00000051297ENSDARG00000035389ENSDART00000051271ENSDART00000139673ENSDART00000141218ENSDART00000144105
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007KX_0001ENSG00000083312ENST00000337273ENST00000505082ENST00000506351ENST00000523768ENSG00000157107ENST00000287761ENST00000430046ENST00000508431ENST00000512348ENSG00000157111ENST00000287773ENST00000454765ENSG00000164325ENST00000296776ENSG00000248930ENST00000502452ENSG00000249743ENST00000427584ENST00000503403ENST00000513379ENST00000515556ENSG00000250747ENST00000512837ENSG00000251467ENST00000506083ENSG00000251543ENST00000511174ENSG00000251599ENST00000508255ENSG00000271926ENST00000607027ENSG00000272081ENST00000606587CIL_0007KX_0002ENSMUSG00000009470ENSMUST00000109399ENSMUST00000109401ENSMUST00000179301ENSMUSG00000041685ENSMUST00000040340ENSMUST00000099277ENSMUST00000109403ENSMUSG00000046082ENSMUST00000050389ENSMUSG00000052485ENSMUST00000064347ENSMUST00000148950ENSMUSG00000092116ENSMUST00000170205CIL_0007KX_0003ENSDARG00000035388ENSDART00000051297ENSDARG00000035389ENSDART00000051271ENSDART00000139673ENSDART00000141218
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000083312 ENST00000337273 N/A N/A N/A 1.048±0.00 N/A N/A 0.766±0.00 N/A 8.123±0.00 N/A N/A 3.381±0.94 3.715±0.05 6.437±0.00
ENST00000503084 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505082 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.820±0.00
ENST00000506351 N/A N/A N/A N/A 3.931±0.00 N/A 1.497±0.00 3.466±1.17 7.836±0.00 6.217±0.00 N/A N/A 3.303±0.00 9.685±0.00
ENST00000506528 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509030 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511754 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513944 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515483 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518279 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520850 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523768 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.479±0.00
ENST00000605210 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000157107 ENST00000287761 N/A N/A N/A N/A N/A N/A N/A 1.258±0.00 N/A N/A N/A N/A N/A N/A
ENST00000430046 6.369±0.00 1.396±0.00 0.786±0.00 1.657±0.40 3.811±1.11 3.488±0.83 2.881±0.00 3.406±0.00 2.093±1.56 5.779±4.38 0.856±0.00 2.676±0.29 2.108±1.20 2.589±0.00
ENST00000503302 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507345 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508431 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.410±0.00 N/A N/A N/A
ENST00000511264 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512348 N/A N/A 1.230±0.00 0.836±0.00 2.055±0.00 1.416±0.00 1.140±0.00 2.461±0.00 3.162±0.00 N/A N/A 1.630±0.94 1.557±0.00 1.578±0.00
ENSG00000157111 ENST00000287773 0.015±0.00 N/A 1.570±0.00 0.396±0.19 N/A 1.080±0.00 N/A 8.519±0.00 1.190±0.00 0.233±0.00 N/A 4.235±3.17 0.175±0.14 N/A
ENST00000454765 N/A 0.267±0.00 N/A N/A 0.681±0.00 1.137±0.49 N/A 4.271±0.00 N/A N/A N/A 0.304±0.07 N/A 0.662±0.09
ENSG00000164325 ENST00000296776 N/A N/A 7.601±0.00 N/A N/A N/A N/A 1.812±0.00 N/A N/A N/A 0.091±0.00 N/A N/A
ENST00000511737 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000248930 ENST00000502452 N/A N/A N/A N/A N/A N/A 0.106±0.00 N/A 0.414±0.00 N/A 0.022±0.00 N/A N/A N/A
ENSG00000249743 ENST00000427584 0.115±0.00 0.094±0.00 N/A 0.682±0.00 0.051±0.00 0.091±0.00 0.270±0.00 N/A 0.089±0.00 N/A 0.042±0.00 N/A N/A 0.190±0.00
ENST00000503403 N/A 0.075±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513280 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513379 N/A N/A N/A 0.161±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515556 0.047±0.00 N/A N/A 0.219±0.00 N/A N/A N/A 0.177±0.00 N/A N/A N/A 0.095±0.00 N/A 0.132±0.00
ENSG00000250747 ENST00000512837 N/A 0.036±0.00 N/A N/A N/A N/A 0.403±0.00 N/A N/A 0.036±0.00 N/A N/A N/A N/A
ENSG00000251467 ENST00000506083 0.046±0.00 0.024±0.00 0.728±0.00 0.076±0.00 1.093±0.00 0.061±0.01 0.158±0.11 0.322±0.00 N/A N/A 0.104±0.00 0.382±0.24 0.186±0.00 0.099±0.03
ENSG00000251543 ENST00000511174 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.282±0.03
ENSG00000251599 ENST00000508255 N/A N/A N/A 0.034±0.00 N/A N/A N/A 0.453±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000271926 ENST00000607027 0.070±0.00 0.118±0.00 N/A 0.280±0.23 0.192±0.00 N/A 0.032±0.00 0.147±0.00 0.132±0.00 0.082±0.00 0.121±0.00 0.127±0.02 1.497±0.73 1.345±0.88
ENSG00000272081 ENST00000606587 0.094±0.00 0.246±0.00 N/A 0.055±0.00 0.363±0.10 N/A N/A 0.866±0.55 0.677±0.54 0.525±0.00 0.781±0.00 0.905±0.00 1.516±0.77 2.628±0.61
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000009470 ENSMUST00000109399 5.298±0.51 2.105±0.00 2.471±0.00 N/A 2.425±0.37 1.948±0.51 1.313±0.06 2.421±0.00 2.449±1.03 2.148±0.07 N/A 5.504±1.58 N/A N/A
ENSMUST00000109401 15.144±2.32 16.876±1.75 13.147±1.57 17.688±11.36 12.273±1.02 9.308±1.04 7.379±0.30 14.853±0.73 8.871±1.76 14.020±1.52 2.181±0.70 16.100±5.86 13.678±6.45 5.660±2.98
ENSMUST00000179271 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000179301 N/A N/A N/A N/A N/A 2.531±0.19 N/A N/A 3.958±0.00 N/A N/A 11.364±0.05 11.657±5.89 23.798±2.23
ENSMUSG00000041685 ENSMUST00000040340 6.593±1.62 3.181±0.89 4.729±0.60 2.270±1.25 3.637±0.92 4.758±2.00 2.898±1.26 6.669±2.07 6.855±5.39 7.447±3.48 1.464±0.86 4.488±2.92 4.649±4.35 1.288±0.56
ENSMUST00000099277 N/A 4.055±2.23 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.063±0.00 N/A N/A
ENSMUST00000109403 N/A N/A N/A 10.781±0.00 N/A N/A N/A N/A N/A N/A N/A 17.714±13.96 20.081±4.60 6.772±0.00
ENSMUST00000179563 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000046082 ENSMUST00000050389 N/A N/A 0.009±0.00 0.022±0.02 0.024±0.01 0.450±0.21 0.013±0.00 214.123±8.76 N/A 0.018±0.00 N/A 0.333±0.11 0.075±0.01 0.015±0.00
ENSMUSG00000052485 ENSMUST00000064347 0.610±0.79 0.104±0.03 0.049±0.00 0.090±0.11 0.070±0.04 102.448±29.16 4.053±0.57 12.568±1.44 0.200±0.12 3.039±0.65 0.250±0.12 8.441±4.07 0.128±0.06 0.132±0.07
ENSMUST00000148950 N/A 0.136±0.06 N/A N/A 0.057±0.00 N/A N/A N/A 0.172±0.07 N/A N/A 3.742±0.00 0.047±0.00 0.060±0.00
ENSMUSG00000092116 ENSMUST00000170205 1.660±0.71 1.204±0.20 0.061±0.01 0.080±0.02 2.904±1.16 2.849±1.07 0.168±0.06 1.042±0.88 0.212±0.14 1.885±0.54 0.133±0.00 1.681±0.98 6.585±12.76 0.424±0.11
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000035388 ENSDART00000051297 N/A N/A N/A N/A N/A N/A N/A 15.949±0.00 N/A N/A 0.976±0.00 N/A N/A N/A
ENSDARG00000035389 ENSDART00000051271 N/A N/A N/A N/A N/A N/A N/A 1.836±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000139673 N/A N/A N/A N/A N/A N/A 1.935±0.00 N/A N/A N/A 0.940±0.00 N/A N/A N/A
ENSDART00000141218 N/A N/A N/A 10.183±3.66 N/A N/A 11.980±0.09 14.223±0.34 N/A N/A 2.382±0.00 N/A N/A N/A
ENSDART00000144105 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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