C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: claudin 12
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000157224 CLDN12 9606 + 7:90383721-90513402 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000287916 CLDN12-001 90403386-90415954 protein_coding
  ENST00000394604 CLDN12-013 90403448-90413238 protein_coding
  ENST00000394605 CLDN12-002 90403467-90415954 protein_coding
  ENST00000416322 CLDN12-015 90383721-90413203 protein_coding
  ENST00000427904 CLDN12-005 90403567-90413055 protein_coding
  ENST00000451941 CLDN12-011 90405581-90513402 processed_transcript
  ENST00000462636 CLDN12-017 90403390-90412480 retained_intron
  ENST00000476475 CLDN12-012 90494170-90513388 processed_transcript
  ENST00000478752 CLDN12-009 90463240-90470347 processed_transcript
  ENST00000483862 CLDN12-006 90403519-90513383 processed_transcript
  ENST00000485696 CLDN12-010 90466410-90513371 processed_transcript
  ENST00000495768 CLDN12-004 90403438-90406080 processed_transcript
  ENST00000496677 CLDN12-016 90403353-90413411 protein_coding
  ENST00000498033 CLDN12-008 90403484-90494416 processed_transcript
  ENST00000498326 CLDN12-007 90403536-90409184 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000287916ENST00000394605
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000287916 2.377±0.00 N/A 7.696±0.00 N/A 6.534±0.00 N/A 2.272±0.00 8.061±3.20 N/A 5.742±1.87 N/A 7.559±3.46 1.801±0.47 10.294±0.00
ENST00000394605 N/A 1.559±0.00 N/A 12.829±0.00 3.557±0.00 3.362±0.74 N/A 6.343±0.00 5.164±0.00 N/A 2.292±0.61 5.378±1.06 2.115±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005923 IEA:ISS tight junction
GO:0016021 IEA integral component of membrane
GO:0016328 IEA lateral plasma membrane
GO:0016338 ISS calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules
GO:0034329 TAS cell junction assembly
GO:0042802 ISS identical protein binding
GO:0045216 TAS cell-cell junction organization
GO:0070830 TAS tight junction assembly
GO:0071944 IEA cell periphery

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003927 cldn12 claudin 12 protein_coding Danio_rerio
ENSMUSG00000046798 Cldn12 claudin 12 protein_coding Mus_musculus

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