C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: claudin 12
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000046798 Cldn12 10090 - 5:5505015-5514958 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000060947 Cldn12-001 5505109-5514873 protein_coding
  ENSMUST00000115445 Cldn12-002 5505223-5514730 protein_coding
  ENSMUST00000115446 Cldn12-003 5505111-5514825 protein_coding
  ENSMUST00000125110 Cldn12-004 5508408-5514789 protein_coding
  ENSMUST00000134157 Cldn12-006 5513222-5514449 processed_transcript
  ENSMUST00000134931 Cldn12-005 5511094-5514958 processed_transcript
  ENSMUST00000179804 Cldn12-201 5505015-5514789 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000060947ENSMUST00000115445ENSMUST00000115446ENSMUST00000179804
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000060947 5.755±1.35 4.466±1.58 6.927±0.27 3.402±1.80 4.004±1.01 11.849±1.41 5.477±0.82 26.201±3.08 13.075±8.09 7.278±1.18 2.950±0.52 5.079±2.39 3.539±2.60 1.728±0.79
ENSMUST00000115445 2.264±0.51 4.711±2.57 1.439±0.00 0.875±0.04 3.180±1.13 5.079±1.54 1.327±0.14 10.056±1.77 7.295±5.27 1.769±0.00 1.182±0.00 2.836±0.00 2.020±0.58 0.526±0.18
ENSMUST00000115446 2.168±0.00 N/A 1.795±0.00 5.369±0.00 1.739±0.00 3.289±0.00 N/A 5.311±0.00 0.713±0.00 N/A 1.307±0.51 4.395±2.29 1.998±0.86 N/A
ENSMUST00000179804 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.820±0.00 N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005923 ISS tight junction
GO:0016021 IEA integral component of membrane
GO:0016328 IDA lateral plasma membrane
GO:0016338 ISS calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules
GO:0042802 ISS identical protein binding
GO:0071944 IDA cell periphery

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003927 cldn12 claudin 12 protein_coding Danio_rerio
ENSG00000157224 CLDN12 claudin 12 protein_coding Homo_sapiens

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