C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: GATA zinc finger domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000157259 GATAD1 9606 + 7:92447453-92458836 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000287957 GATAD1-001 92447453-92458836 protein_coding
  ENST00000465247 GATAD1-004 92454055-92456537 retained_intron
  ENST00000493878 GATAD1-002 92449718-92457161 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000287957ENST00000493878
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000287957 5.624±0.00 7.329±0.00 3.109±0.00 2.904±0.42 4.818±1.45 7.011±4.71 2.036±1.36 6.146±3.74 4.599±0.19 5.083±3.00 1.829±0.00 7.565±3.29 5.863±2.32 5.200±2.03
ENST00000493878 N/A N/A N/A N/A 5.425±0.00 N/A 2.220±0.00 3.498±0.00 N/A 5.523±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004SS CIL_0004SS_0002 CGP 7:92246234-92458836

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IDA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000027612 gatad1 GATA zinc finger domain containing 1 protein_coding Danio_rerio
ENSMUSG00000007415 Gatad1 GATA zinc finger domain containing 1 protein_coding Mus_musculus

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