C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004SS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000060768-ENSDARG00000027612 CGP 7955 19:45411876-45482727
GeneTranscriptPositionBiotype
ENSDARG00000027612 (gatad1)
GATA zinc finger domain containing 1 		ENSDART00000051712 (gatad1-001) 45475568-45482727 protein_coding
ENSDARG00000060768 (ankib1a)
ankyrin repeat and IBR domain containing 1a 		ENSDART00000085980 (ankib1a-201) 45421730-45466593 protein_coding
ENSDART00000133628 (ankib1a-001) 45411876-45466958 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0004SS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000001629-ENSG00000157259 CGP 9606 7:92246234-92458836
GeneTranscriptPositionBiotype
ENSG00000001629 (ANKIB1)
ankyrin repeat and IBR domain containing 1 		ENST00000265742 (ANKIB1-001) 92246234-92401384 protein_coding
ENST00000413588 (ANKIB1-006) 92343138-92362260 nonsense_mediated_decay
ENST00000422095 (ANKIB1-002) 92371572-92399348 nonsense_mediated_decay
ENST00000439883 (ANKIB1-004) 92307359-92343117 nonsense_mediated_decay
ENST00000442183 (ANKIB1-003) 92294462-92307572 protein_coding
ENST00000465883 (ANKIB1-007) 92395869-92397837 retained_intron
ENST00000486698 (ANKIB1-005) 92319422-92319966 processed_transcript
ENSG00000157259 (GATAD1)
GATA zinc finger domain containing 1 		ENST00000287957 (GATAD1-001) 92447453-92458836 protein_coding
ENST00000465247 (GATAD1-004) 92454055-92456537 retained_intron
ENST00000493878 (GATAD1-002) 92449718-92457161 retained_intron
ENSG00000230927 (TMBIM7P)
transmembrane BAX inhibitor motif containing 7, pseudogene 		ENST00000418074 (TMBIM7P-001) 92412976-92439562 unitary_pseudogene

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004SS_0001ENSDARG00000027612ENSDART00000051712ENSDARG00000060768ENSDART00000085980ENSDART00000133628CIL_0004SS_0002ENSG00000001629ENST00000265742ENST00000413588ENST00000422095ENST00000439883ENST00000442183ENST00000465883ENST00000486698ENSG00000157259ENST00000287957ENST00000465247ENST00000493878ENSG00000230927ENST00000418074
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004SS_0001ENSDARG00000027612ENSDART00000051712ENSDARG00000060768ENSDART00000085980ENSDART00000133628CIL_0004SS_0002ENSG00000001629ENST00000265742ENST00000422095ENST00000439883ENST00000442183ENSG00000157259ENST00000287957ENST00000493878ENSG00000230927ENST00000418074
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000027612 ENSDART00000051712 N/A N/A N/A 1.921±0.35 N/A N/A 2.260±0.34 2.491±0.00 0.223±0.00 N/A 0.799±0.00 N/A N/A N/A
ENSDARG00000060768 ENSDART00000085980 N/A N/A N/A N/A N/A N/A 0.695±0.00 2.319±0.00 0.300±0.00 N/A N/A N/A N/A N/A
ENSDART00000133628 N/A N/A N/A 0.625±0.36 N/A N/A 0.476±0.25 1.019±0.10 N/A N/A 0.579±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000001629 ENST00000265742 3.435±0.00 3.061±0.00 3.077±0.00 6.431±2.67 4.434±1.02 3.781±0.19 2.196±1.11 3.872±1.79 2.162±1.52 2.359±0.68 0.690±0.58 3.993±0.91 2.530±0.68 7.612±1.32
ENST00000413588 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000422095 N/A N/A 3.640±0.00 N/A 2.070±0.00 N/A N/A 0.931±0.00 N/A N/A 1.116±0.00 3.217±0.32 2.033±0.00 10.193±0.00
ENST00000439883 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.085±0.00 N/A N/A N/A
ENST00000442183 N/A N/A 9.368±0.00 32.216±0.00 13.945±0.00 11.467±0.00 9.504±0.00 5.236±0.00 13.986±0.00 10.998±0.00 N/A 13.679±0.00 N/A N/A
ENST00000465883 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486698 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000157259 ENST00000287957 5.624±0.00 7.329±0.00 3.109±0.00 2.904±0.42 4.818±1.45 7.011±4.71 2.036±1.36 6.146±3.74 4.599±0.19 5.083±3.00 1.829±0.00 7.565±3.29 5.863±2.32 5.200±2.03
ENST00000465247 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493878 N/A N/A N/A N/A 5.425±0.00 N/A 2.220±0.00 3.498±0.00 N/A 5.523±0.00 N/A N/A N/A N/A
ENSG00000230927 ENST00000418074 N/A N/A N/A 0.037±0.00 0.011±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.046±0.02

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