C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GATA zinc finger domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000287957 GATAD1-001 ENSG00000157259 9606 + 7:92447453-92458836 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000287957
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000287957 5.624±0.00 7.329±0.00 3.109±0.00 2.904±0.42 4.818±1.45 7.011±4.71 2.036±1.36 6.146±3.74 4.599±0.19 5.083±3.00 1.829±0.00 7.565±3.29 5.863±2.32 5.200±2.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004SS CIL_0004SS_0002 CGP 7:92246234-92458836

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IDA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000007559 Gatad1-001 protein_coding Mus_musculus 0 1050
ENSMUST00000119783 Gatad1-002 protein_coding Mus_musculus 0 785
ENSMUST00000189556 St8sia4-004 protein_coding Mus_musculus 0.000000000001 81
ENSMUST00000108055 Kif24-001 protein_coding Mus_musculus 0.00000000005 75
ENSMUST00000135387 Trim24-008 retained_intron Mus_musculus 0.000000002 69
ENSMUST00000175682 Kdm2a-003 retained_intron Mus_musculus 0.000000002 69
ENSMUST00000086274 Gm10490-201 protein_coding Mus_musculus 0.0000001 64

Loading