C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: C-type lectin domain family 18, member A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000157322 CLEC18A 9606 + 16:69950705-69964452 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000288040 CLEC18A-001 69951180-69964238 protein_coding
  ENST00000393701 CLEC18A-002 69950907-69963986 protein_coding
  ENST00000449317 CLEC18A-201 69951233-69963984 protein_coding
  ENST00000561889 CLEC18A-007 69951741-69959549 protein_coding
  ENST00000565245 CLEC18A-006 69951473-69953812 retained_intron
  ENST00000565705 CLEC18A-005 69951277-69961400 retained_intron
  ENST00000568102 CLEC18A-004 69951174-69964452 retained_intron
  ENST00000568461 CLEC18A-003 69950986-69963986 protein_coding
  ENST00000615430 CLEC18A-202 69950705-69964347 protein_coding
  ENST00000617654 CLEC18A-203 69950986-69964347 protein_coding
  ENST00000620064 CLEC18A-204 69950986-69964347 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000449317ENST00000565245ENST00000565705ENST00000568102ENST00000568461ENST00000617654
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000449317 N/A N/A 0.692±0.00 N/A N/A N/A N/A 0.555±0.00 0.013±0.00 N/A 0.188±0.00 N/A 0.125±0.00
ENST00000565245 0.011±0.00 0.292±0.00 0.267±0.00 0.159±0.00 0.067±0.01 0.085±0.00 0.062±0.00 0.318±0.00 0.035±0.00 0.066±0.00 0.056±0.02 0.055±0.00 0.206±0.10
ENST00000565705 N/A N/A N/A N/A 0.085±0.00 N/A N/A N/A N/A N/A N/A N/A 0.074±0.00
ENST00000568102 N/A N/A N/A N/A 0.106±0.00 N/A 0.017±0.00 N/A N/A N/A N/A N/A N/A
ENST00000568461 N/A N/A N/A 0.035±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000617654 N/A N/A N/A N/A N/A 0.046±0.00 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005576 IEA extracellular region
GO:0030246 IEA carbohydrate binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000033633 Clec18a C-type lectin domain family 18, member A protein_coding Mus_musculus

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