C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: C-type lectin domain family 18, member A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000449317 CLEC18A-201 ENSG00000157322 9606 + 16:69951233-69963984 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderKidneyLiverOvaryTestisENST00000449317
Transcript ID Bladder Kidney Liver Ovary Testis
ENST00000449317 0.692±0.00 0.555±0.00 0.013±0.00 0.188±0.00 0.125±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0030246 IEA carbohydrate binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000186384 Clec18a-001 nonsense_mediated_decay Mus_musculus 0 1070
ENSMUST00000188466 Clec18a-003 protein_coding Mus_musculus 0 1070
ENSMUST00000191030 Clec18a-004 nonsense_mediated_decay Mus_musculus 0 1070
ENSMUST00000039597 Clec18a-007 protein_coding Mus_musculus 0 1059
ENSMUST00000191469 Clec18a-005 nonsense_mediated_decay Mus_musculus 0 1059
ENSMUST00000190778 Clec18a-006 nonsense_mediated_decay Mus_musculus 0 1059
ENSMUST00000190222 Clec18a-002 nonsense_mediated_decay Mus_musculus 0 905

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