C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TSC22 domain family, member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000157514 TSC22D3 9606 - X:107713221-107777342 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000315660 TSC22D3-008 107713221-107775985 protein_coding
  ENST00000372382 TSC22D3-003 107714000-107722272 protein_coding
  ENST00000372383 TSC22D3-004 107713224-107775787 protein_coding
  ENST00000372384 TSC22D3-005 107713224-107775988 protein_coding
  ENST00000372390 TSC22D3-002 107713221-107716545 protein_coding
  ENST00000372397 TSC22D3-001 107713221-107717135 protein_coding
  ENST00000480691 TSC22D3-011 107715903-107777055 protein_coding
  ENST00000486554 TSC22D3-006 107714677-107716401 protein_coding
  ENST00000502650 TSC22D3-009 107715923-107776115 protein_coding
  ENST00000502961 TSC22D3-014 107775246-107777329 protein_coding
  ENST00000503515 TSC22D3-017 107715773-107717062 protein_coding
  ENST00000505965 TSC22D3-015 107775167-107777337 protein_coding
  ENST00000506081 TSC22D3-007 107714370-107777067 protein_coding
  ENST00000506724 TSC22D3-010 107775118-107776258 protein_coding
  ENST00000510887 TSC22D3-012 107715912-107776714 protein_coding
  ENST00000514426 TSC22D3-016 107714487-107777078 protein_coding
  ENST00000514897 TSC22D3-013 107715898-107777342 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000372383ENST00000372390ENST00000372397ENST00000486554
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000372383 10.882±0.00 N/A N/A N/A 6.965±0.00 N/A N/A N/A 3.981±0.00 N/A 19.110±0.00 16.356±3.52 N/A N/A
ENST00000372390 25.954±0.00 40.630±0.00 N/A 16.368±11.12 32.527±0.00 49.101±0.00 19.685±0.00 81.500±0.00 8.301±0.00 37.535±0.00 33.255±0.00 34.664±13.21 25.991±9.00 26.397±10.05
ENST00000372397 59.595±0.00 39.182±0.00 5.048±0.00 11.345±2.03 17.909±1.87 49.244±37.43 23.496±17.94 31.791±19.82 19.079±5.04 51.639±19.13 75.840±47.68 32.354±15.59 94.907±38.00 16.207±11.17
ENST00000486554 N/A N/A 4.757±0.00 N/A 9.708±0.00 6.257±0.00 3.435±0.00 N/A 16.733±0.00 15.424±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006JE CIL_0006JE_0001 CGP X:107628424-107777342

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005829 TAS cytosol
GO:0006355 TAS:IEA regulation of transcription, DNA-templated
GO:0006970 IEA response to osmotic stress
GO:0007589 IEA body fluid secretion
GO:0034220 TAS ion transmembrane transport
GO:0043426 IEA MRF binding
GO:0048642 IEA negative regulation of skeletal muscle tissue development
GO:0055085 TAS transmembrane transport
GO:0070236 IEA negative regulation of activation-induced cell death of T cells

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034086 TSC22 domain family, member 3 protein_coding Danio_rerio
ENSMUSG00000031431 Tsc22d3 TSC22 domain family, member 3 protein_coding Mus_musculus

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