C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TSC22 domain family, member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031431 Tsc22d3 10090 - X:140539528-140600659 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000055738 Tsc22d3-001 140539528-140543187 protein_coding
  ENSMUST00000112995 Tsc22d3-003 140539528-140542668 processed_transcript
  ENSMUST00000112996 Tsc22d3-006 140540262-140600659 protein_coding
  ENSMUST00000123898 Tsc22d3-005 140540351-140548338 protein_coding
  ENSMUST00000133023 Tsc22d3-002 140539537-140543101 retained_intron
  ENSMUST00000152048 Tsc22d3-004 140543103-140548529 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000055738ENSMUST00000112995ENSMUST00000112996ENSMUST00000123898
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000055738 66.019±33.87 64.044±10.53 43.110±9.17 5.777±2.76 53.698±13.56 54.756±7.27 51.319±20.33 27.419±0.86 36.568±34.36 185.717±99.89 73.113±31.67 36.083±14.72 10.141±2.58 3.171±0.34
ENSMUST00000112995 N/A N/A 9.630±0.92 8.082±3.09 4.801±0.00 N/A N/A N/A 0.607±0.00 N/A N/A 9.523±4.14 3.770±0.00 N/A
ENSMUST00000112996 18.014±0.76 4.294±0.00 N/A N/A N/A N/A 6.023±0.27 N/A 1.578±0.57 N/A 19.996±0.00 3.698±0.00 24.409±12.95 2.285±0.77
ENSMUST00000123898 N/A N/A N/A 3.660±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006JE CIL_0006JE_0002 CGP X:140456613-140600659

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006970 IDA response to osmotic stress
GO:0007589 IEA body fluid secretion
GO:0043426 IPI MRF binding
GO:0048642 IDA negative regulation of skeletal muscle tissue development
GO:0070236 IDA negative regulation of activation-induced cell death of T cells

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034086 TSC22 domain family, member 3 protein_coding Danio_rerio
ENSG00000157514 TSC22D3 TSC22 domain family, member 3 protein_coding Homo_sapiens

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