C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TSC22 domain family, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000372397 TSC22D3-001 ENSG00000157514 9606 - X:107713221-107717135 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000372397
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000372397 59.595±0.00 39.182±0.00 5.048±0.00 11.345±2.03 17.909±1.87 49.244±37.43 23.496±17.94 31.791±19.82 19.079±5.04 51.639±19.13 75.840±47.68 32.354±15.59 94.907±38.00 16.207±11.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006JE CIL_0006JE_0001 CGP X:107628424-107777342

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005829 TAS cytosol
GO:0006355 TAS:IEA regulation of transcription, DNA-templated
GO:0034220 TAS ion transmembrane transport
GO:0055085 TAS transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000055738 Tsc22d3-001 protein_coding Mus_musculus 0 1814
ENSMUST00000112995 Tsc22d3-003 processed_transcript Mus_musculus 0 1604
ENSMUST00000133023 Tsc22d3-002 retained_intron Mus_musculus 0 1530
ENSMUST00000112996 Tsc22d3-006 protein_coding Mus_musculus 0 1110
ENSMUST00000123898 Tsc22d3-005 protein_coding Mus_musculus 0 968
ENSMUST00000118496 Gm8812-001 processed_pseudogene Mus_musculus 0 403
ENSDART00000054115 tsc22d3-001 protein_coding Danio_rerio 0 311
ENSMUST00000152048 Tsc22d3-004 processed_transcript Mus_musculus 0 230

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