C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 213, member B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000157870 FAM213B 9606 + 1:2586491-2591469 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000378424 FAM213B-002 2586780-2591467 protein_coding
  ENST00000378425 FAM213B-201 2586750-2591467 protein_coding
  ENST00000378427 FAM213B-003 2586798-2591463 protein_coding
  ENST00000419916 FAM213B-001 2586775-2591468 protein_coding
  ENST00000444521 FAM213B-202 2586750-2591467 protein_coding
  ENST00000464043 FAM213B-009 2586817-2589805 processed_transcript
  ENST00000465233 FAM213B-011 2586833-2588977 protein_coding
  ENST00000474659 FAM213B-007 2586540-2589658 processed_transcript
  ENST00000476686 FAM213B-005 2588594-2591468 processed_transcript
  ENST00000477045 FAM213B-013 2587085-2588745 processed_transcript
  ENST00000481683 FAM213B-012 2587042-2589513 processed_transcript
  ENST00000484099 FAM213B-004 2587078-2591469 processed_transcript
  ENST00000493183 FAM213B-006 2586491-2589632 processed_transcript
  ENST00000498083 FAM213B-010 2586877-2588992 protein_coding
  ENST00000537325 FAM213B-014 2586796-2589947 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000378424ENST00000378425ENST00000378427ENST00000419916ENST00000464043ENST00000465233ENST00000474659ENST00000476686ENST00000481683ENST00000484099ENST00000493183ENST00000498083ENST00000537325
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000378424 N/A N/A 0.662±0.00 N/A N/A 0.540±0.00 0.206±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000378425 N/A N/A N/A 2.513±0.00 0.574±0.00 1.741±0.00 0.466±0.00 N/A N/A 0.147±0.00 N/A N/A N/A N/A
ENST00000378427 3.053±0.00 12.529±0.00 N/A 8.469±0.00 4.890±0.00 N/A 0.615±0.00 6.895±0.00 N/A 0.170±0.00 N/A 8.214±5.18 5.635±2.43 N/A
ENST00000419916 2.936±0.00 N/A N/A 5.852±3.91 N/A 4.636±0.00 1.228±0.00 N/A 1.695±0.11 2.800±0.00 N/A 9.236±3.77 7.449±0.00 7.101±0.00
ENST00000464043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.776±0.00 5.691±0.00 N/A
ENST00000465233 N/A N/A N/A N/A N/A N/A N/A 0.632±0.00 N/A N/A N/A N/A N/A N/A
ENST00000474659 N/A N/A N/A N/A N/A 2.550±0.00 0.210±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000476686 N/A N/A N/A N/A N/A 0.880±0.00 N/A 0.446±0.00 N/A N/A 0.348±0.00 1.645±0.00 N/A N/A
ENST00000481683 N/A N/A N/A N/A 0.751±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484099 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.357±0.00 N/A N/A
ENST00000493183 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.140±0.00 N/A N/A N/A N/A
ENST00000498083 N/A N/A 0.558±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 5.196±0.00 N/A N/A
ENST00000537325 N/A N/A N/A N/A N/A N/A N/A 0.255±0.00 N/A N/A 0.106±0.00 N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001516 ISS prostaglandin biosynthetic process
GO:0005737 ISS cytoplasm
GO:0005783 ISS endoplasmic reticulum
GO:0005829 IEA cytosol
GO:0016616 ISS oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0019369 TAS arachidonic acid metabolic process
GO:0019371 TAS cyclooxygenase pathway
GO:0043209 ISS myelin sheath
GO:0044281 TAS small molecule metabolic process
GO:0047017 ISS prostaglandin-F synthase activity
GO:0055114 IEA oxidation-reduction process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000029795 fam213b family with sequence similarity 213, member B protein_coding Danio_rerio
ENSMUSG00000029059 Fam213b family with sequence similarity 213, member B protein_coding Mus_musculus

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