C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 213, member B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029059 Fam213b 10090 - 4:154895504-154899135 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030935 Fam213b-001 154896399-154899110 protein_coding
  ENSMUST00000123513 Fam213b-003 154895504-154899038 processed_transcript
  ENSMUST00000132281 Fam213b-002 154897335-154899135 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000030935ENSMUST00000123513ENSMUST00000132281
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000030935 68.627±49.14 43.430±9.03 14.355±0.35 18.699±12.98 23.230±10.57 7.195±2.37 38.440±1.70 38.557±4.22 9.959±5.28 5.728±1.18 105.658±9.77 18.346±9.20 3.316±1.71
ENSMUST00000123513 N/A N/A N/A 54.695±0.00 N/A N/A N/A N/A N/A N/A N/A 37.837±0.00 2.798±0.80
ENSMUST00000132281 N/A 15.845±0.00 N/A N/A 10.115±4.10 N/A N/A N/A N/A N/A N/A N/A 1.851±0.85

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007XZ CIL_0007XZ_0002 VISTA 4:154471105-155072345
CIL_00058B CIL_00058B_0002 CGP 4:154869585-154899135

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001516 IDA prostaglandin biosynthetic process
GO:0005737 IDA cytoplasm
GO:0005783 IDA endoplasmic reticulum
GO:0005829 IDA cytosol
GO:0016616 IDA oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0043209 IDA myelin sheath
GO:0047017 IMP prostaglandin-F synthase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000029795 fam213b family with sequence similarity 213, member B protein_coding Danio_rerio
ENSG00000157870 FAM213B family with sequence similarity 213, member B protein_coding Homo_sapiens

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