C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 213, member B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000419916 FAM213B-001 ENSG00000157870 9606 + 1:2586775-2591468 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonHeartLiverLungOvaryPlacentaTestisENST00000419916
Transcript ID Adipose Brain Colon Heart Liver Lung Ovary Placenta Testis
ENST00000419916 2.936±0.00 5.852±3.91 4.636±0.00 1.228±0.00 1.695±0.11 2.800±0.00 9.236±3.77 7.449±0.00 7.101±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001516 ISS prostaglandin biosynthetic process
GO:0005737 ISS cytoplasm
GO:0005783 ISS endoplasmic reticulum
GO:0016616 ISS oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0019369 TAS arachidonic acid metabolic process
GO:0019371 TAS cyclooxygenase pathway
GO:0043209 ISS myelin sheath
GO:0044281 TAS small molecule metabolic process
GO:0047017 ISS prostaglandin-F synthase activity
GO:0055114 IEA oxidation-reduction process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030935 Fam213b-001 protein_coding Mus_musculus 0 579
ENSMUST00000132281 Fam213b-002 protein_coding Mus_musculus 0 399
ENSMUST00000123513 Fam213b-003 processed_transcript Mus_musculus 0 379

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