C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: keratinocyte associated protein 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000157992 KRTCAP3 9606 + 2:27442366-27446481 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000288873 KRTCAP3-001 27442381-27444297 protein_coding
  ENST00000407293 KRTCAP3-002 27442446-27444297 protein_coding
  ENST00000452499 KRTCAP3-006 27443452-27446479 protein_coding
  ENST00000453171 KRTCAP3-003 27442398-27444295 nonsense_mediated_decay
  ENST00000464699 KRTCAP3-004 27442745-27444297 retained_intron
  ENST00000494572 KRTCAP3-005 27443254-27444291 retained_intron
  ENST00000543753 KRTCAP3-201 27442366-27446481 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyLiverLungOvaryPlacentaENST00000288873ENST00000407293ENST00000453171ENST00000494572
Transcript ID Kidney Liver Lung Ovary Placenta
ENST00000288873 N/A 1.858±0.00 9.694±0.00 37.986±0.00 4.261±0.00
ENST00000407293 N/A N/A N/A 24.045±0.00 N/A
ENST00000453171 N/A N/A N/A N/A 3.990±0.00
ENST00000494572 2.434±0.00 N/A N/A 33.181±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00012H CIL_00012H_0001 CGP 2:27427790-27446481
CIL_0001DG CIL_0001DG_0001 CGP 2:27442366-27489789

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000090072 CU462878.1 Uncharacterized protein protein_coding Danio_rerio
ENSMUSG00000029149 Krtcap3 keratinocyte associated protein 3 protein_coding Mus_musculus

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