C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: keratinocyte associated protein 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029149 Krtcap3 10090 + 5:31251691-31253202 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000054829 Krtcap3-001 31251706-31253197 protein_coding
  ENSMUST00000075611 Krtcap3-004 31251725-31253197 protein_coding
  ENSMUST00000114570 Krtcap3-002 31251722-31253202 protein_coding
  ENSMUST00000128821 Krtcap3-009 31252555-31253197 retained_intron
  ENSMUST00000134186 Krtcap3-005 31251716-31252891 retained_intron
  ENSMUST00000142904 Krtcap3-008 31252336-31253199 retained_intron
  ENSMUST00000144631 Krtcap3-006 31251762-31252698 retained_intron
  ENSMUST00000148890 Krtcap3-010 31252480-31253197 retained_intron
  ENSMUST00000152695 Krtcap3-003 31251691-31253197 retained_intron
  ENSMUST00000156802 Krtcap3-007 31251927-31252996 retained_intron

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000054829ENSMUST00000075611ENSMUST00000114570ENSMUST00000128821ENSMUST00000134186ENSMUST00000142904ENSMUST00000144631ENSMUST00000148890ENSMUST00000152695ENSMUST00000156802
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000054829 6.262±0.68 N/A 8.324±3.19 N/A 6.531±0.81 82.121±11.90 N/A 4.736±0.93 2.339±1.37 16.161±3.79 N/A 10.304±5.00 5.053±2.97 1.919±0.92
ENSMUST00000075611 4.764±0.46 N/A 2.677±0.00 N/A 2.884±0.00 50.982±15.42 0.478±0.00 3.141±0.43 0.601±0.26 6.227±1.28 N/A 9.529±3.67 4.323±2.37 N/A
ENSMUST00000114570 N/A N/A N/A N/A N/A N/A N/A 2.403±0.00 N/A N/A N/A 1.738±0.00 N/A N/A
ENSMUST00000128821 N/A N/A N/A 1.646±0.49 N/A N/A N/A N/A N/A N/A 0.685±0.16 2.093±0.31 2.273±0.00 1.192±0.00
ENSMUST00000134186 2.127±1.53 2.164±0.36 7.349±2.29 1.684±0.63 3.160±0.42 16.791±4.95 0.794±0.33 1.445±0.06 1.183±0.32 4.280±0.78 0.800±0.39 5.532±1.12 2.659±0.45 1.214±0.24
ENSMUST00000142904 N/A N/A N/A 1.348±0.00 N/A N/A 0.974±0.00 N/A 1.143±0.15 N/A 1.065±0.33 N/A N/A 2.512±0.00
ENSMUST00000144631 4.037±2.59 1.641±0.18 6.412±2.91 N/A 6.249±1.01 38.980±0.00 1.239±0.19 1.375±0.00 1.071±0.45 7.490±0.92 0.734±0.18 6.247±2.42 5.534±2.89 2.432±0.68
ENSMUST00000148890 N/A N/A N/A 2.819±0.00 N/A N/A 1.027±0.00 N/A N/A N/A 0.879±0.15 4.776±1.16 3.868±0.00 1.442±0.00
ENSMUST00000152695 0.847±0.13 1.796±0.51 2.645±0.00 0.513±0.00 3.328±1.26 11.509±1.17 0.972±0.07 2.517±0.00 1.268±0.60 4.794±1.25 N/A 4.059±1.45 N/A 2.115±0.47
ENSMUST00000156802 4.176±2.03 N/A N/A N/A N/A N/A N/A 2.206±0.00 0.473±0.00 N/A 0.505±0.01 3.245±1.03 4.135±3.04 2.723±1.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00012H CIL_00012H_0002 CGP 5:31240864-31253202
CIL_0001DG CIL_0001DG_0002 CGP 5:31251691-31291114

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000090072 CU462878.1 Uncharacterized protein protein_coding Danio_rerio
ENSG00000157992 KRTCAP3 keratinocyte associated protein 3 protein_coding Homo_sapiens

Loading