C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ciliogenesis associated TTC17 interacting protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000158428 CATIP 9606 + 2:218356856-218368099 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000289388 CATIP-001 218356856-218368094 protein_coding
  ENST00000480532 CATIP-004 218356863-218357790 retained_intron
  ENST00000481940 CATIP-002 218357703-218368099 processed_transcript
  ENST00000494447 CATIP-003 218365508-218368093 retained_intron
  ENST00000495773 CATIP-005 218357485-218360630 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000289388ENST00000480532ENST00000481940ENST00000494447ENST00000495773
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000289388 N/A N/A N/A N/A N/A 0.059±0.00 N/A N/A 0.112±0.00 1.619±0.00 N/A 2.633±0.00 0.671±0.38 4.523±0.45
ENST00000480532 N/A N/A N/A N/A N/A N/A N/A 0.825±0.00 N/A N/A N/A N/A N/A N/A
ENST00000481940 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.570±0.65 N/A 0.184±0.01 0.555±0.37 N/A
ENST00000494447 0.250±0.00 0.610±0.00 0.408±0.00 0.192±0.00 0.216±0.00 0.045±0.00 0.094±0.00 N/A 0.098±0.00 0.084±0.00 0.014±0.00 0.137±0.09 N/A N/A
ENST00000495773 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.545±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005VH CIL_0005VH_0001 CGP 2:218274192-218368099
CIL_00054V CIL_00054V_0001 CGP 2:218356856-218396894

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0015629 IDA actin cytoskeleton
GO:0030041 IMP actin filament polymerization
GO:0044782 IMP cilium organization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063009 CATIP ciliogenesis associated TTC17 interacting protein protein_coding Danio_rerio
ENSMUSG00000073650 Catip ciliogenesis associated TTC17 interacting protein protein_coding Mus_musculus

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