C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ciliogenesis associated TTC17 interacting protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000073650 Catip 10090 + 1:74362108-74369321 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000097697 Catip-001 74362108-74369321 protein_coding
  ENSMUST00000128445 Catip-002 74362366-74367798 protein_coding
  ENSMUST00000186688 Catip-004 74364531-74366742 retained_intron
  ENSMUST00000191010 Catip-003 74362442-74369150 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000097697ENSMUST00000128445ENSMUST00000186688ENSMUST00000191010
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000097697 0.467±0.00 0.089±0.03 0.337±0.00 N/A 0.239±0.00 0.261±0.00 0.084±0.03 N/A 0.040±0.00 0.738±0.09 0.104±0.05 0.864±0.29 0.135±0.02 3.748±1.17
ENSMUST00000128445 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.220±0.00 N/A N/A N/A
ENSMUST00000186688 N/A 0.263±0.00 N/A N/A N/A N/A N/A 0.358±0.00 N/A N/A 0.234±0.00 N/A N/A N/A
ENSMUST00000191010 0.430±0.21 0.358±0.14 0.491±0.14 0.365±0.00 0.209±0.09 0.374±0.19 0.294±0.07 0.177±0.07 0.043±0.03 1.213±0.49 0.102±0.07 2.189±1.68 0.111±0.06 4.388±1.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005VH CIL_0005VH_0002 CGP 1:74288247-74369321
CIL_00054V CIL_00054V_0002 CGP 1:74362108-74386062

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0005886 ISS plasma membrane
GO:0015629 ISS actin cytoskeleton
GO:0030041 ISS actin filament polymerization
GO:0044782 ISS cilium organization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063009 CATIP ciliogenesis associated TTC17 interacting protein protein_coding Danio_rerio
ENSG00000158428 CATIP ciliogenesis associated TTC17 interacting protein protein_coding Homo_sapiens

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