C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: dynein, cytoplasmic 1, intermediate chain 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000158560 DYNC1I1 9606 + 7:95772506-96110071 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000324972 DYNC1I1-004 95772590-96098412 protein_coding
  ENST00000359388 DYNC1I1-007 95772598-96098424 protein_coding
  ENST00000413338 DYNC1I1-003 95772604-95818963 protein_coding
  ENST00000437599 DYNC1I1-005 95772597-96098424 protein_coding
  ENST00000447467 DYNC1I1-001 95772554-96098424 protein_coding
  ENST00000457059 DYNC1I1-002 95804284-96097999 protein_coding
  ENST00000497626 DYNC1I1-006 96032667-96056164 processed_transcript
  ENST00000518089 DYNC1I1-008 95804218-95828128 protein_coding
  ENST00000519371 DYNC1I1-010 95837618-96028321 processed_transcript
  ENST00000524053 DYNC1I1-009 95772579-95813279 protein_coding
  ENST00000537881 DYNC1I1-201 95772506-96110071 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000359388ENST00000413338ENST00000437599ENST00000447467ENST00000457059ENST00000519371ENST00000524053ENST00000537881
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000359388 0.738±0.00 N/A N/A 8.734±3.87 N/A 2.988±0.00 3.015±2.73 0.363±0.00 N/A 0.053±0.00 0.704±0.00 0.659±0.41 0.162±0.09 0.497±0.09
ENST00000413338 N/A N/A N/A N/A N/A 0.667±0.00 N/A N/A N/A 0.196±0.00 N/A 0.372±0.00 N/A N/A
ENST00000437599 N/A N/A N/A N/A N/A N/A N/A N/A 1.737±0.00 N/A N/A N/A N/A N/A
ENST00000447467 N/A 2.497±0.00 N/A 25.629±7.35 0.577±0.34 3.096±0.00 2.676±2.09 0.798±0.00 N/A N/A N/A 0.632±0.17 N/A 1.214±0.71
ENST00000457059 N/A N/A N/A N/A 0.143±0.08 N/A N/A 0.576±0.00 0.092±0.00 N/A 0.231±0.00 0.113±0.00 0.031±0.00 N/A
ENST00000519371 N/A N/A N/A N/A 0.544±0.00 0.328±0.00 0.730±0.00 N/A N/A 0.906±0.00 N/A 0.546±0.46 N/A N/A
ENST00000524053 N/A N/A 1.197±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.090±0.00 N/A N/A
ENST00000537881 N/A N/A N/A N/A 0.106±0.00 N/A N/A N/A N/A N/A 0.189±0.00 0.030±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008H4 CIL_0008H4_0001 VISTA 7:95307310-95911146
CIL_00053G CIL_00053G_0001 CGP 7:95583499-96110071
CIL_0008AS CIL_0008AS_0001 VISTA 7:95767218-96367717
CIL_00053F CIL_00053F_0001 CGP 7:95772506-96322147

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000776 IDA kinetochore
GO:0000922 IDA spindle pole
GO:0003774 TAS motor activity
GO:0003777 ISS microtubule motor activity
GO:0005515 IPI:IEA protein binding
GO:0005829 TAS cytosol
GO:0005868 ISS:IEA cytoplasmic dynein complex
GO:0005874 IEA microtubule
GO:0007018 IEA microtubule-based movement
GO:0008017 ISS microtubule binding
GO:0008152 ISS metabolic process
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0030507 IDA spectrin binding
GO:0031982 IDA vesicle
GO:0036464 IDA cytoplasmic ribonucleoprotein granule
GO:0047496 ISS vesicle transport along microtubule
GO:0048471 ISS perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000022487 DYNC1I1 (1 of 2) dynein, cytoplasmic 1, intermediate chain 1 protein_coding Danio_rerio
ENSDARG00000060948 dync1i1 dynein, cytoplasmic 1, intermediate chain 1 protein_coding Danio_rerio
ENSMUSG00000029757 Dync1i1 dynein cytoplasmic 1 intermediate chain 1 protein_coding Mus_musculus

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