C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dynein, cytoplasmic 1, intermediate chain 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000457059 DYNC1I1-002 ENSG00000158560 9606 + 7:95804284-96097999 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastKidneyLiverMuscleOvaryPlacentaENST00000457059
Transcript ID Breast Kidney Liver Muscle Ovary Placenta
ENST00000457059 0.143±0.08 0.576±0.00 0.092±0.00 0.231±0.00 0.113±0.00 0.031±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008H4 CIL_0008H4_0001 VISTA 7:95307310-95911146
CIL_00053G CIL_00053G_0001 CGP 7:95583499-96110071
CIL_0008AS CIL_0008AS_0001 VISTA 7:95767218-96367717
CIL_00053F CIL_00053F_0001 CGP 7:95772506-96322147

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000776 IDA kinetochore
GO:0000922 IDA spindle pole
GO:0003774 TAS motor activity
GO:0003777 ISS microtubule motor activity
GO:0005515 IPI:IEA protein binding
GO:0005829 TAS cytosol
GO:0005868 ISS:IEA cytoplasmic dynein complex
GO:0005874 IEA microtubule
GO:0007018 IEA microtubule-based movement
GO:0008017 ISS microtubule binding
GO:0008152 ISS metabolic process
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0030507 IDA spectrin binding
GO:0031982 IDA vesicle
GO:0036464 IDA cytoplasmic ribonucleoprotein granule
GO:0047496 ISS vesicle transport along microtubule
GO:0048471 ISS perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115559 Dync1i1-003 protein_coding Mus_musculus 0 2808
ENSMUST00000115555 Dync1i1-002 protein_coding Mus_musculus 0 2510
ENSMUST00000115556 Dync1i1-001 protein_coding Mus_musculus 0 2453
ENSMUST00000115554 Dync1i1-004 protein_coding Mus_musculus 0 2246
ENSMUST00000153942 Dync1i1-005 protein_coding Mus_musculus 1.4013e-45 189

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