C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: dynein cytoplasmic 1 intermediate chain 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029757 Dync1i1 10090 + 6:5725639-6028039 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000115554 Dync1i1-004 5725812-6028039 protein_coding
  ENSMUST00000115555 Dync1i1-002 5725763-6028030 protein_coding
  ENSMUST00000115556 Dync1i1-001 5725639-6028039 protein_coding
  ENSMUST00000115559 Dync1i1-003 5725791-6028039 protein_coding
  ENSMUST00000153942 Dync1i1-005 5725818-5767050 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000115554ENSMUST00000115555ENSMUST00000115556ENSMUST00000115559
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000115554 0.491±0.55 0.677±0.37 0.100±0.00 1.205±0.26 0.134±0.02 1.122±0.31 0.149±0.02 0.465±0.08 0.030±0.03 0.101±0.00 0.042±0.01 6.334±4.10 0.160±0.09 3.093±1.08
ENSMUST00000115555 N/A 0.449±0.10 N/A N/A 0.078±0.00 0.643±0.33 N/A 0.347±0.00 N/A 0.057±0.00 N/A 3.663±1.69 N/A 0.854±0.39
ENSMUST00000115556 N/A 0.107±0.03 N/A 2.425±1.94 N/A N/A N/A N/A N/A 0.089±0.00 N/A N/A N/A N/A
ENSMUST00000115559 N/A 0.341±0.17 N/A 14.272±14.74 N/A 0.559±0.02 N/A 0.274±0.12 N/A 0.129±0.00 N/A 5.605±2.11 N/A 0.495±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008H4 CIL_0008H4_0002 VISTA 6:5207995-5812142
CIL_00053G CIL_00053G_0002 CGP 6:5483351-6028039
CIL_0008AS CIL_0008AS_0002 VISTA 6:5697407-6297858
CIL_0008Z2 CIL_0008Z2_0002 VISTA 6:5705995-6306609
CIL_00053F CIL_00053F_0002 CGP 6:5725639-6217173

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000776 ISS kinetochore
GO:0000922 ISS spindle pole
GO:0003777 ISS microtubule motor activity
GO:0005515 IPI protein binding
GO:0005868 ISS cytoplasmic dynein complex
GO:0005874 IEA microtubule
GO:0007018 IEA microtubule-based movement
GO:0008017 ISS microtubule binding
GO:0008152 ISS metabolic process
GO:0030286 TAS dynein complex
GO:0030507 ISO spectrin binding
GO:0031982 ISS vesicle
GO:0036464 IEA cytoplasmic ribonucleoprotein granule
GO:0047496 ISS vesicle transport along microtubule
GO:0048471 ISS perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000022487 DYNC1I1 (1 of 2) dynein, cytoplasmic 1, intermediate chain 1 protein_coding Danio_rerio
ENSDARG00000060948 dync1i1 dynein, cytoplasmic 1, intermediate chain 1 protein_coding Danio_rerio
ENSG00000158560 DYNC1I1 dynein, cytoplasmic 1, intermediate chain 1 protein_coding Homo_sapiens

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