C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: interferon (alpha, beta and omega) receptor 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000159110 IFNAR2 9606 + 21:33229901-33265675 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000342101 IFNAR2-003 33230136-33264525 protein_coding
  ENST00000342136 IFNAR2-002 33229974-33264525 protein_coding
  ENST00000382238 IFNAR2-006 33230141-33262855 nonsense_mediated_decay
  ENST00000382264 IFNAR2-004 33229901-33262756 protein_coding
  ENST00000404220 IFNAR2-001 33229971-33265675 protein_coding
  ENST00000413881 IFNAR2-009 33230182-33262855 protein_coding
  ENST00000417007 IFNAR2-007 33248744-33262757 nonsense_mediated_decay
  ENST00000420068 IFNAR2-020 33229982-33246853 processed_transcript
  ENST00000443073 IFNAR2-010 33230182-33262855 protein_coding
  ENST00000447980 IFNAR2-008 33230409-33248854 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000342101ENST00000342136ENST00000382264
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000342101 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.690±0.00
ENST00000342136 4.182±0.00 7.325±0.00 0.332±0.00 1.271±0.22 2.548±0.95 1.810±0.56 0.890±0.67 2.003±0.00 1.291±0.16 3.441±0.93 0.241±0.00 2.621±0.96 2.846±0.00
ENST00000382264 8.004±0.00 13.739±0.00 N/A 5.245±0.00 5.131±0.00 3.804±0.00 2.476±0.00 4.761±2.52 4.177±0.00 6.217±0.00 N/A 5.280±1.12 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UY CIL_0007UY_0001 VISTA 21:32793653-33396760
CIL_0007HU CIL_0007HU_0001 CGP 21:33070144-33265675
CIL_0003TF CIL_0003TF_0001 CGP 21:33229901-33283212

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004905 IDA type I interferon receptor activity
GO:0005515 IPI:IEA protein binding
GO:0005576 TAS extracellular region
GO:0005615 IDA extracellular space
GO:0005886 TAS plasma membrane
GO:0005887 IDA integral component of plasma membrane
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0007166 TAS cell surface receptor signaling pathway
GO:0007259 TAS JAK-STAT cascade
GO:0008283 IEA cell proliferation
GO:0009615 TAS response to virus
GO:0019221 TAS cytokine-mediated signaling pathway
GO:0019901 IPI protein kinase binding
GO:0019962 IPI type I interferon binding
GO:0035455 IDA response to interferon-alpha
GO:0060337 TAS type I interferon signaling pathway
GO:0060338 TAS regulation of type I interferon-mediated signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000022971 Ifnar2 interferon (alpha and beta) receptor 2 protein_coding Mus_musculus

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