C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: interferon (alpha and beta) receptor 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022971 Ifnar2 10090 + 16:91372783-91405589 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000023693 Ifnar2-001 91372783-91405589 protein_coding
  ENSMUST00000089042 Ifnar2-005 91372899-91405366 protein_coding
  ENSMUST00000117836 Ifnar2-002 91372850-91394040 protein_coding
  ENSMUST00000134491 Ifnar2-004 91372841-91393863 protein_coding
  ENSMUST00000139503 Ifnar2-003 91387789-91391776 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023693ENSMUST00000089042ENSMUST00000117836ENSMUST00000134491
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023693 9.376±3.02 22.814±1.24 6.427±0.36 2.614±1.30 7.515±1.85 5.461±0.00 N/A 5.341±1.23 7.410±2.51 12.620±0.21 0.660±0.27 12.584±5.93 3.181±0.73 0.711±0.18
ENSMUST00000089042 N/A N/A N/A 1.740±0.00 N/A N/A N/A N/A N/A N/A 0.636±0.16 9.891±0.00 3.785±0.90 0.272±0.00
ENSMUST00000117836 43.925±14.26 N/A 21.119±1.03 3.900±0.38 24.299±7.88 N/A 19.434±0.93 17.548±2.45 31.078±6.35 25.559±1.66 2.185±0.55 33.141±13.94 15.647±0.73 2.035±0.22
ENSMUST00000134491 32.839±0.00 137.838±48.39 N/A 8.869±0.00 39.744±0.00 N/A N/A 20.116±0.00 38.557±7.79 33.218±0.00 N/A 36.483±5.94 18.493±1.20 1.305±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TI CIL_0008TI_0002 VISTA 16:90804484-91407069
CIL_00087M CIL_00087M_0002 VISTA 16:90839145-91442270
CIL_0009BQ CIL_0009BQ_0002 VISTA 16:90840152-91441411
CIL_0007UY CIL_0007UY_0002 VISTA 16:90990868-91593443
CIL_0007HU CIL_0007HU_0002 CGP 16:91269772-91405589
CIL_0003TF CIL_0003TF_0002 CGP 16:91372783-91419451

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004905 IDA:ISS type I interferon receptor activity
GO:0005615 IDA extracellular space
GO:0005887 ISS integral component of plasma membrane
GO:0006357 IDA regulation of transcription from RNA polymerase II promoter
GO:0008283 IDA cell proliferation
GO:0016021 TAS integral component of membrane
GO:0019901 IEA protein kinase binding
GO:0019962 IEA type I interferon binding
GO:0035455 ISS response to interferon-alpha
GO:0060337 IDA:ISS type I interferon signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000159110 IFNAR2 interferon (alpha, beta and omega) receptor 2 protein_coding Homo_sapiens

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