C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007HU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000184221-ENSG00000159110 CGP 9606 21:33070144-33265675
GeneTranscriptPositionBiotype
ENSG00000159110 (IFNAR2)
interferon (alpha, beta and omega) receptor 2 		ENST00000342101 (IFNAR2-003) 33230136-33264525 protein_coding
ENST00000342136 (IFNAR2-002) 33229974-33264525 protein_coding
ENST00000382238 (IFNAR2-006) 33230141-33262855 nonsense_mediated_decay
ENST00000382264 (IFNAR2-004) 33229901-33262756 protein_coding
ENST00000404220 (IFNAR2-001) 33229971-33265675 protein_coding
ENST00000413881 (IFNAR2-009) 33230182-33262855 protein_coding
ENST00000417007 (IFNAR2-007) 33248744-33262757 nonsense_mediated_decay
ENST00000420068 (IFNAR2-020) 33229982-33246853 processed_transcript
ENST00000443073 (IFNAR2-010) 33230182-33262855 protein_coding
ENST00000447980 (IFNAR2-008) 33230409-33248854 protein_coding
ENSG00000184221 (OLIG1)
oligodendrocyte transcription factor 1 		ENST00000382348 (OLIG1-001) 33070144-33072420 protein_coding
ENST00000426947 (OLIG1-002) 33070965-33072413 protein_coding
ENST00000498799 (OLIG1-003) 33071668-33072413 processed_transcript
ENSG00000223799 (IL10RB-AS1)
IL10RB antisense RNA 1 (head to head) 		ENST00000411998 (IL10RB-AS1-001) 33263873-33266260 antisense
ENSG00000226433 (AP000290.7)
 ENST00000450830 (AP000290.7-001) 33156632-33159110 antisense
ENSG00000226527 (AP000289.6)
 ENST00000421051 (AP000289.6-001) 33111699-33123703 lincRNA
ENSG00000227757 (AP000282.2)
 ENST00000454622 (AP000282.2-001) 32913649-33071104 antisense
ENSG00000229086 (C21orf54)
long intergenic non-protein coding RNA 1548 		ENST00000451980 (C21orf54-001) 33165470-33170236 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0007HU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000046160-ENSMUSG00000022971 CGP 10090 16:91269772-91405589
GeneTranscriptPositionBiotype
ENSMUSG00000022971 (Ifnar2)
interferon (alpha and beta) receptor 2 		ENSMUST00000023693 (Ifnar2-001) 91372783-91405589 protein_coding
ENSMUST00000089042 (Ifnar2-005) 91372899-91405366 protein_coding
ENSMUST00000117836 (Ifnar2-002) 91372850-91394040 protein_coding
ENSMUST00000134491 (Ifnar2-004) 91372841-91393863 protein_coding
ENSMUST00000139503 (Ifnar2-003) 91387789-91391776 protein_coding
ENSMUSG00000046160 (Olig1)
oligodendrocyte transcription factor 1 		ENSMUST00000056882 (Olig1-001) 91269772-91271933 protein_coding
ENSMUSG00000085865 (Gm15966)
predicted gene 15966 		ENSMUST00000136853 (Gm15966-002) 91320452-91328995 lincRNA
ENSMUST00000146994 (Gm15966-001) 91320677-91325740 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007HU_0001ENSG00000159110ENST00000342101ENST00000342136ENST00000382238ENST00000382264ENST00000404220ENST00000413881ENST00000417007ENST00000420068ENST00000443073ENST00000447980ENSG00000184221ENST00000382348ENST00000426947ENST00000498799ENSG00000223799ENST00000411998ENSG00000226433ENST00000450830ENSG00000226527ENST00000421051ENSG00000227757ENST00000454622ENSG00000229086ENST00000451980CIL_0007HU_0002ENSMUSG00000022971ENSMUST00000023693ENSMUST00000089042ENSMUST00000117836ENSMUST00000134491ENSMUST00000139503ENSMUSG00000046160ENSMUST00000056882ENSMUSG00000085865ENSMUST00000136853ENSMUST00000146994
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007HU_0001ENSG00000159110ENST00000342101ENST00000342136ENST00000382264ENSG00000184221ENST00000382348ENST00000426947ENSG00000223799ENST00000411998ENSG00000226433ENST00000450830ENSG00000226527ENST00000421051ENSG00000227757ENST00000454622ENSG00000229086ENST00000451980CIL_0007HU_0002ENSMUSG00000022971ENSMUST00000023693ENSMUST00000089042ENSMUST00000117836ENSMUST00000134491ENSMUSG00000046160ENSMUST00000056882ENSMUSG00000085865ENSMUST00000136853
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000159110 ENST00000342101 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.690±0.00
ENST00000342136 4.182±0.00 7.325±0.00 0.332±0.00 1.271±0.22 2.548±0.95 1.810±0.56 0.890±0.67 2.003±0.00 1.291±0.16 3.441±0.93 0.241±0.00 2.621±0.96 N/A 2.846±0.00
ENST00000382238 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000382264 8.004±0.00 13.739±0.00 N/A 5.245±0.00 5.131±0.00 3.804±0.00 2.476±0.00 4.761±2.52 4.177±0.00 6.217±0.00 N/A 5.280±1.12 N/A N/A
ENST00000404220 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000413881 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000417007 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000420068 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443073 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000447980 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000184221 ENST00000382348 N/A N/A 0.386±0.00 31.627±27.45 N/A 0.114±0.00 N/A 1.563±0.00 N/A 0.032±0.00 0.120±0.00 0.030±0.01 0.132±0.00 1.100±0.08
ENST00000426947 N/A N/A N/A N/A N/A N/A 0.027±0.00 N/A N/A 0.042±0.00 N/A 0.097±0.00 0.088±0.00 2.558±1.75
ENST00000498799 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000223799 ENST00000411998 8.750±0.00 13.118±0.00 N/A 3.368±0.00 N/A 2.342±0.00 1.627±1.22 1.563±0.00 3.724±0.00 7.919±0.00 1.076±0.00 4.191±1.58 11.299±0.00 1.817±0.00
ENSG00000226433 ENST00000450830 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.088±0.03
ENSG00000226527 ENST00000421051 N/A N/A N/A 0.081±0.05 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.311±1.61
ENSG00000227757 ENST00000454622 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.311±0.00 N/A N/A
ENSG00000229086 ENST00000451980 N/A N/A N/A N/A N/A N/A 0.117±0.00 N/A N/A N/A N/A 0.059±0.00 N/A 2.094±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022971 ENSMUST00000023693 9.376±3.02 22.814±1.24 6.427±0.36 2.614±1.30 7.515±1.85 5.461±0.00 N/A 5.341±1.23 7.410±2.51 12.620±0.21 0.660±0.27 12.584±5.93 3.181±0.73 0.711±0.18
ENSMUST00000089042 N/A N/A N/A 1.740±0.00 N/A N/A N/A N/A N/A N/A 0.636±0.16 9.891±0.00 3.785±0.90 0.272±0.00
ENSMUST00000117836 43.925±14.26 N/A 21.119±1.03 3.900±0.38 24.299±7.88 N/A 19.434±0.93 17.548±2.45 31.078±6.35 25.559±1.66 2.185±0.55 33.141±13.94 15.647±0.73 2.035±0.22
ENSMUST00000134491 32.839±0.00 137.838±48.39 N/A 8.869±0.00 39.744±0.00 N/A N/A 20.116±0.00 38.557±7.79 33.218±0.00 N/A 36.483±5.94 18.493±1.20 1.305±0.00
ENSMUST00000139503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000046160 ENSMUST00000056882 0.450±0.15 0.429±0.29 0.112±0.01 19.144±0.34 0.266±0.13 0.027±0.01 0.089±0.03 0.084±0.04 0.409±0.39 0.072±0.03 N/A 0.167±0.07 0.058±0.04 1.381±0.70
ENSMUSG00000085865 ENSMUST00000136853 N/A N/A N/A N/A N/A 0.203±0.00 N/A N/A N/A N/A N/A N/A 0.148±0.00 1.576±0.45
ENSMUST00000146994 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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