C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: insulin-like growth factor 2 mRNA binding protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000159217 IGF2BP1 9606 + 17:48997412-49055650 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000290341 IGF2BP1-001 48997412-49055650 protein_coding
  ENST00000431824 IGF2BP1-002 48997746-49049444 protein_coding
  ENST00000499130 IGF2BP1-005 49013917-49036833 processed_transcript
  ENST00000505562 IGF2BP1-006 49026392-49038438 retained_intron
  ENST00000510023 IGF2BP1-003 48997486-49004858 processed_transcript
  ENST00000515586 IGF2BP1-004 48997763-49036933 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000290341ENST00000431824ENST00000499130ENST00000505562ENST00000515586
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000290341 0.030±0.00 N/A 0.006±0.00 N/A 0.005±0.00 N/A N/A N/A 0.008±0.00 3.285±0.00 0.523±0.01 N/A
ENST00000431824 N/A N/A N/A N/A N/A N/A 0.385±0.00 N/A N/A N/A N/A 4.081±0.00
ENST00000499130 0.399±0.00 0.589±0.00 N/A 0.218±0.00 N/A N/A N/A N/A 0.054±0.00 N/A N/A N/A
ENST00000505562 0.297±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515586 N/A 0.669±0.00 0.463±0.00 0.189±0.00 0.370±0.00 0.130±0.00 0.628±0.00 0.100±0.00 0.095±0.00 0.088±0.00 3.978±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0003729 IDA mRNA binding
GO:0003730 IDA mRNA 3'-UTR binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0006403 IEA RNA localization
GO:0010467 TAS gene expression
GO:0010494 IDA cytoplasmic stress granule
GO:0010610 IMP regulation of mRNA stability involved in response to stress
GO:0017148 IDA negative regulation of translation
GO:0030425 IEA dendrite
GO:0030529 IDA ribonucleoprotein complex
GO:0042035 IC regulation of cytokine biosynthetic process
GO:0044822 IDA poly(A) RNA binding
GO:0045182 IDA translation regulator activity
GO:0048027 IDA mRNA 5'-UTR binding
GO:0051028 IEA mRNA transport
GO:0070934 IDA CRD-mediated mRNA stabilization
GO:0070937 IDA CRD-mediated mRNA stability complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061478 igf2bp1 insulin-like growth factor 2 mRNA binding protein 1 protein_coding Danio_rerio
ENSMUSG00000013415 Igf2bp1 insulin-like growth factor 2 mRNA binding protein 1 protein_coding Mus_musculus

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