C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: insulin-like growth factor 2 mRNA binding protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000013415 Igf2bp1 10090 - 11:95957163-96005940 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000013559 Igf2bp1-001 95957163-96005940 protein_coding
  ENSMUST00000138513 Igf2bp1-005 95963436-95967835 processed_transcript
  ENSMUST00000141515 Igf2bp1-002 95978382-95982608 processed_transcript
  ENSMUST00000146586 Igf2bp1-003 95973979-95982611 processed_transcript
  ENSMUST00000152896 Igf2bp1-004 95973144-95982594 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000013559ENSMUST00000138513ENSMUST00000146586ENSMUST00000152896
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000013559 0.016±0.01 0.025±0.01 0.151±0.02 4.352±0.06 0.018±0.01 0.142±0.04 0.007±0.00 2.596±1.97 0.074±0.02 0.011±0.00 0.026±0.01 15.711±8.23 0.371±0.08
ENSMUST00000138513 N/A 0.071±0.02 N/A N/A N/A N/A N/A N/A N/A N/A 0.172±0.00 N/A 1.916±0.00
ENSMUST00000146586 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.296±0.00 N/A N/A
ENSMUST00000152896 0.055±0.00 0.103±0.00 N/A N/A N/A 0.682±0.10 0.142±0.01 N/A 0.924±0.00 N/A 0.342±0.06 N/A 3.135±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003729 ISS mRNA binding
GO:0003730 ISS mRNA 3'-UTR binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006403 IEA RNA localization
GO:0010494 ISS cytoplasmic stress granule
GO:0010610 ISS regulation of mRNA stability involved in response to stress
GO:0017148 IEA negative regulation of translation
GO:0030425 IEA dendrite
GO:0030529 ISS ribonucleoprotein complex
GO:0044822 IEA poly(A) RNA binding
GO:0045182 IEA translation regulator activity
GO:0048027 IEA mRNA 5'-UTR binding
GO:0051028 IEA mRNA transport
GO:0070934 IEA CRD-mediated mRNA stabilization
GO:0070937 ISS CRD-mediated mRNA stability complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061478 igf2bp1 insulin-like growth factor 2 mRNA binding protein 1 protein_coding Danio_rerio
ENSG00000159217 IGF2BP1 insulin-like growth factor 2 mRNA binding protein 1 protein_coding Homo_sapiens

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