C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: insulin-like growth factor 2 mRNA binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000290341 IGF2BP1-001 ENSG00000159217 9606 + 17:48997412-49055650 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonLungOvaryPlacentaENST00000290341
Transcript ID Adipose Brain Colon Lung Ovary Placenta
ENST00000290341 0.030±0.00 0.006±0.00 0.005±0.00 0.008±0.00 3.285±0.00 0.523±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0003729 IDA mRNA binding
GO:0003730 IDA mRNA 3'-UTR binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0006403 IEA RNA localization
GO:0010467 TAS gene expression
GO:0010494 IDA cytoplasmic stress granule
GO:0010610 IMP regulation of mRNA stability involved in response to stress
GO:0017148 IDA negative regulation of translation
GO:0030425 IEA dendrite
GO:0030529 IDA ribonucleoprotein complex
GO:0042035 IC regulation of cytokine biosynthetic process
GO:0044822 IDA poly(A) RNA binding
GO:0045182 IDA translation regulator activity
GO:0048027 IDA mRNA 5'-UTR binding
GO:0051028 IEA mRNA transport
GO:0070934 IDA CRD-mediated mRNA stabilization
GO:0070937 IDA CRD-mediated mRNA stability complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000013559 Igf2bp1-001 protein_coding Mus_musculus 0 2579
ENSMUST00000152896 Igf2bp1-004 processed_transcript Mus_musculus 0 575
ENSMUST00000146586 Igf2bp1-003 processed_transcript Mus_musculus 0 483

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