C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nuclear receptor subfamily 2, group F, member 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000160113 NR2F6 9606 - 19:17231883-17245940 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000291442 NR2F6-001 17231883-17245940 protein_coding
  ENST00000596878 NR2F6-002 17235702-17244504 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000291442
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000291442 19.507±0.00 34.123±0.00 1.341±0.00 11.506±4.92 32.730±28.47 20.385±11.02 17.404±14.46 30.710±22.38 33.797±30.18 15.507±13.92 14.702±10.46 34.798±18.28 44.376±14.79 21.660±1.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00010P CIL_00010P_0001 CGP 19:17226204-17245940

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0000980 IEA RNA polymerase II distal enhancer sequence-specific DNA binding
GO:0001227 IEA RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0003677 TAS DNA binding
GO:0003700 IDA:IEA sequence-specific DNA binding transcription factor activity
GO:0003707 IEA steroid hormone receptor activity
GO:0004879 IEA:TAS ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0004887 TAS thyroid hormone receptor activity
GO:0005515 IPI protein binding
GO:0005634 IEA:IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006367 TAS transcription initiation from RNA polymerase II promoter
GO:0007165 TAS signal transduction
GO:0008270 IEA zinc ion binding
GO:0010467 TAS gene expression
GO:0030522 IEA intracellular receptor signaling pathway
GO:0043153 IEA entrainment of circadian clock by photoperiod
GO:0043401 IEA steroid hormone mediated signaling pathway
GO:0043565 IDA:IEA sequence-specific DNA binding
GO:0048666 IEA neuron development
GO:0050965 IEA detection of temperature stimulus involved in sensory perception of pain

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003165 nr2f6b nuclear receptor subfamily 2, group F, member 6b protein_coding Danio_rerio
ENSDARG00000003607 nr2f6a nuclear receptor subfamily 2, group F, member 6a protein_coding Danio_rerio
ENSMUSG00000002393 Nr2f6 nuclear receptor subfamily 2, group F, member 6 protein_coding Mus_musculus

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