C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: trefoil factor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000160182 TFF1 9606 - 21:42362282-42366594 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000291527 TFF1-001 42362282-42366594 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000291527
Transcript ID Adipose Bladder Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000291527 0.091±0.00 0.150±0.00 37.581±33.58 1.258±0.78 0.149±0.00 0.089±0.00 1.976±1.60 9.051±7.51 0.131±0.00 0.135±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QJ CIL_0008QJ_0001 VISTA 21:42290762-42894212
CIL_00036E CIL_00036E_0001 CGP 21:42346357-42366594
CIL_00036F CIL_00036F_0001 CGP 21:42362282-42396846

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005615 IEA extracellular space
GO:0005975 TAS carbohydrate metabolic process
GO:0007586 NAS digestion
GO:0008083 IEA growth factor activity
GO:0008285 IEA negative regulation of cell proliferation
GO:0010039 IEA response to iron ion
GO:0030154 IEA cell differentiation
GO:0030277 IEA maintenance of gastrointestinal epithelium
GO:0032355 IDA response to estradiol
GO:0035902 IEA response to immobilization stress
GO:0043434 IEA response to peptide hormone

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000024032 Tff1 trefoil factor 1 protein_coding Mus_musculus

Loading