C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00036F_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000160182-ENSG00000160183 CGP 9606 21:42362282-42396846
GeneTranscriptPositionBiotype
ENSG00000160182 (TFF1)
trefoil factor 1 		ENST00000291527 (TFF1-001) 42362282-42366594 protein_coding
ENSG00000160183 (TMPRSS3)
transmembrane protease, serine 3 		ENST00000291532 (TMPRSS3-001) 42371890-42396846 protein_coding
ENST00000398397 (TMPRSS3-003) 42381876-42396091 protein_coding
ENST00000398405 (TMPRSS3-004) 42371890-42395943 protein_coding
ENST00000433957 (TMPRSS3-002) 42371890-42396059 protein_coding
ENST00000474596 (TMPRSS3-006) 42371890-42389118 processed_transcript
ENST00000476848 (TMPRSS3-007) 42371890-42383751 retained_intron
ENST00000478680 (TMPRSS3-008) 42381878-42382753 processed_transcript
ENST00000482761 (TMPRSS3-005) 42371890-42390418 retained_intron
CIL_00036F_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024032-ENSMUSG00000024034 CGP 10090 17:31161396-31198975
GeneTranscriptPositionBiotype
ENSMUSG00000024032 (Tff1)
trefoil factor 1 		ENSMUST00000024831 (Tff1-001) 31161396-31165053 protein_coding
ENSMUSG00000024034 (Tmprss3)
transmembrane protease, serine 3 		ENSMUST00000024833 (Tmprss3-002) 31179272-31197749 protein_coding
ENSMUST00000114549 (Tmprss3-001) 31179272-31198975 protein_coding
ENSMUSG00000086010 (Gm15318)
predicted gene 15318 		ENSMUST00000139773 (Gm15318-003) 31152752-31161488 antisense
ENSMUST00000146320 (Gm15318-001) 31152752-31163052 antisense
ENSMUST00000148215 (Gm15318-002) 31152752-31162323 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00036F_0001ENSG00000160182ENST00000291527ENSG00000160183ENST00000291532ENST00000398397ENST00000398405ENST00000433957ENST00000474596ENST00000476848ENST00000478680ENST00000482761CIL_00036F_0002ENSMUSG00000024032ENSMUST00000024831ENSMUSG00000024034ENSMUST00000024833ENSMUST00000114549ENSMUSG00000086010ENSMUST00000139773ENSMUST00000146320ENSMUST00000148215
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00036F_0001ENSG00000160182ENST00000291527ENSG00000160183ENST00000291532ENST00000398397ENST00000398405ENST00000433957ENST00000474596ENST00000476848ENST00000478680CIL_00036F_0002ENSMUSG00000024032ENSMUST00000024831ENSMUSG00000024034ENSMUST00000024833ENSMUST00000114549ENSMUSG00000086010ENSMUST00000139773ENSMUST00000146320ENSMUST00000148215
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000160182 ENST00000291527 0.091±0.00 N/A 0.150±0.00 N/A 37.581±33.58 1.258±0.78 N/A 0.149±0.00 0.089±0.00 1.976±1.60 N/A 9.051±7.51 0.131±0.00 0.135±0.00
ENSG00000160183 ENST00000291532 0.028±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000398397 N/A N/A 0.180±0.00 0.426±0.00 N/A N/A N/A N/A N/A 0.753±0.00 N/A 1.228±0.00 N/A N/A
ENST00000398405 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.061±0.00 0.047±0.00
ENST00000433957 N/A N/A N/A 0.072±0.00 0.547±0.00 0.020±0.00 N/A 0.161±0.00 0.104±0.00 N/A N/A 6.403±4.51 0.256±0.14 0.248±0.00
ENST00000474596 0.195±0.00 0.143±0.00 0.249±0.00 0.504±0.00 N/A 0.079±0.00 0.011±0.00 0.247±0.00 N/A N/A 0.039±0.00 5.014±3.56 0.135±0.09 N/A
ENST00000476848 N/A N/A N/A N/A 0.239±0.00 N/A N/A N/A 0.077±0.00 N/A N/A 4.266±0.00 N/A N/A
ENST00000478680 N/A N/A N/A N/A 2.025±0.00 N/A N/A N/A N/A 1.156±0.00 N/A N/A N/A N/A
ENST00000482761 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024032 ENSMUST00000024831 0.088±0.00 3.470±2.80 0.027±0.00 0.045±0.00 0.182±0.06 0.449±0.00 N/A N/A N/A 0.211±0.00 N/A 1.691±0.99 0.534±0.12 0.155±0.09
ENSMUSG00000024034 ENSMUST00000024833 N/A N/A 0.012±0.00 0.010±0.01 0.059±0.02 0.031±0.01 N/A 0.019±0.01 0.300±0.16 0.048±0.01 N/A 0.045±0.02 0.125±0.10 0.035±0.03
ENSMUST00000114549 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.031±0.00 N/A
ENSMUSG00000086010 ENSMUST00000139773 N/A N/A N/A N/A N/A N/A N/A N/A 1.709±0.91 N/A N/A N/A N/A N/A
ENSMUST00000146320 N/A N/A N/A N/A N/A 0.038±0.00 N/A 5.371±1.22 0.676±0.34 N/A N/A 0.028±0.00 0.140±0.03 N/A
ENSMUST00000148215 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.122±0.00 N/A N/A

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