C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ficolin (collagen/fibrinogen domain containing lectin) 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000160339 FCN2 9606 + 9:134880812-134887520 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000291744 FCN2-001 134880812-134887520 protein_coding
  ENST00000350339 FCN2-201 134880812-134887520 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverLungOvaryTestisENST00000291744ENST00000350339
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Lung Ovary Testis
ENST00000291744 0.470±0.00 0.455±0.00 0.956±0.00 N/A 10.636±9.36 84.115±0.00 N/A N/A 0.677±0.00
ENST00000350339 0.438±0.00 N/A 0.988±0.78 0.052±0.00 10.666±0.00 N/A 0.070±0.04 0.074±0.04 0.055±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001EU CIL_0001EU_0001 CGP 9:134641774-134887520

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001867 TAS complement activation, lectin pathway
GO:0003823 TAS antigen binding
GO:0005509 TAS calcium ion binding
GO:0005515 IPI protein binding
GO:0005576 TAS extracellular region
GO:0005581 IEA collagen trimer
GO:0006956 TAS complement activation
GO:0008228 TAS opsonization
GO:0030246 IEA carbohydrate binding
GO:0045087 TAS innate immune response
GO:0048306 IPI calcium-dependent protein binding
GO:0070062 IDA extracellular vesicular exosome
GO:0072562 IDA blood microparticle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000026835 Fcnb ficolin B protein_coding Mus_musculus

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