C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ficolin B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026835 Fcnb 10090 - 2:28076378-28084885 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000028179 Fcnb-001 28076378-28084885 protein_coding
  ENSMUST00000117486 Fcnb-002 28078099-28084885 protein_coding
  ENSMUST00000135472 Fcnb-003 28079739-28084885 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonLiverLungOvaryPlacentaENSMUST00000028179ENSMUST00000117486ENSMUST00000135472
Transcript ID Adipose Brain Breast Colon Liver Lung Ovary Placenta
ENSMUST00000028179 0.028±0.00 0.047±0.00 0.091±0.04 0.116±0.00 20.037±10.34 0.066±0.00 N/A 0.005±0.00
ENSMUST00000117486 N/A 0.024±0.00 N/A N/A N/A 0.060±0.00 0.067±0.00 0.008±0.00
ENSMUST00000135472 N/A 0.058±0.00 N/A 0.472±0.00 N/A N/A N/A 0.045±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001EU CIL_0001EU_0002 CGP 2:27886425-28084885
CIL_0001ET CIL_0001ET_0002 CGP 2:28076378-28230736

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001867 IEA complement activation, lectin pathway
GO:0005576 IEA extracellular region
GO:0005581 IEA collagen trimer
GO:0030246 IEA carbohydrate binding
GO:0033691 IDA sialic acid binding
GO:0097367 IDA carbohydrate derivative binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000085265 FCN1 ficolin (collagen/fibrinogen domain containing) 1 protein_coding Homo_sapiens
ENSG00000160339 FCN2 ficolin (collagen/fibrinogen domain containing lectin) 2 protein_coding Homo_sapiens

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