C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 19 open reading frame 47
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000160392 C19orf47 9606 - 19:40319536-40348527 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000357884 C19orf47-003 40321416-40341885 nonsense_mediated_decay
  ENST00000392035 C19orf47-002 40321063-40348386 protein_coding
  ENST00000577617 C19orf47-008 40321063-40326423 protein_coding
  ENST00000580606 C19orf47-005 40328413-40343805 protein_coding
  ENST00000580977 C19orf47-007 40328470-40348514 nonsense_mediated_decay
  ENST00000582006 C19orf47-006 40326409-40348519 protein_coding
  ENST00000582734 C19orf47-004 40321079-40324684 retained_intron
  ENST00000582783 C19orf47-001 40319536-40348527 protein_coding
  ENST00000584868 C19orf47-009 40321080-40322339 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonMuscleOvaryTestisENST00000392035ENST00000582783ENST00000584868
Transcript ID Colon Muscle Ovary Testis
ENST00000392035 N/A 4.834±0.00 11.719±0.00 32.543±0.00
ENST00000582783 0.551±0.00 N/A N/A N/A
ENST00000584868 N/A 88.978±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020611 C18H19orf47 chromosome 19 open reading frame 47 protein_coding Danio_rerio
ENSMUSG00000049643 2310022A10Rik RIKEN cDNA 2310022A10 gene protein_coding Mus_musculus

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