C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 2310022A10 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000049643 2310022A10Rik 10090 + 7:27553233-27582099 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000067386 2310022A10Rik-001 27553233-27582099 protein_coding
  ENSMUST00000186501 2310022A10Rik-007 27574467-27580420 processed_transcript
  ENSMUST00000186826 2310022A10Rik-004 27560497-27573327 retained_intron
  ENSMUST00000187032 2310022A10Rik-003 27560476-27582094 protein_coding
  ENSMUST00000187960 2310022A10Rik-002 27553286-27582099 protein_coding
  ENSMUST00000190656 2310022A10Rik-005 27565658-27580634 protein_coding
  ENSMUST00000190903 2310022A10Rik-006 27553270-27554071 processed_transcript
  ENSMUST00000191126 2310022A10Rik-008 27553267-27574718 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000067386ENSMUST00000186826ENSMUST00000187032ENSMUST00000187960ENSMUST00000190903ENSMUST00000191126
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000067386 7.504±2.32 8.708±3.33 6.516±0.46 8.311±4.90 9.644±2.61 6.394±3.07 11.630±0.68 5.056±1.64 5.614±4.13 10.646±0.21 4.321±0.28 8.083±5.23 7.877±3.71 6.689±3.05
ENSMUST00000186826 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.601±0.00 1.920±0.00 0.137±0.00
ENSMUST00000187032 N/A N/A N/A N/A 5.632±0.00 1.848±0.00 16.248±3.61 N/A N/A N/A 22.384±2.34 N/A N/A N/A
ENSMUST00000187960 N/A N/A N/A 4.164±0.66 6.223±0.00 N/A N/A N/A N/A N/A 8.576±1.56 N/A 2.178±1.04 2.696±0.81
ENSMUST00000190903 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.334±0.00
ENSMUST00000191126 N/A N/A N/A N/A N/A 4.106±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020611 C18H19orf47 chromosome 19 open reading frame 47 protein_coding Danio_rerio
ENSG00000160392 C19orf47 chromosome 19 open reading frame 47 protein_coding Homo_sapiens

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