C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 394
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000160908 ZNF394 9606 - 7:99486519-99500324 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000337673 ZNF394-001 99493240-99500297 protein_coding
  ENST00000394177 ZNF394-005 99494579-99500324 processed_transcript
  ENST00000426306 ZNF394-002 99493242-99500264 protein_coding
  ENST00000462024 ZNF394-007 99486519-99498798 processed_transcript
  ENST00000464401 ZNF394-006 99498585-99499704 retained_intron
  ENST00000481881 ZNF394-004 99497862-99500275 retained_intron
  ENST00000485576 ZNF394-003 99498484-99500297 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000337673ENST00000426306ENST00000481881ENST00000485576
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000337673 6.324±0.00 8.865±0.00 1.262±0.00 1.872±1.09 4.167±1.67 4.162±0.97 5.879±0.00 7.112±0.00 1.298±0.06 5.480±4.56 2.042±0.00 6.192±3.29 4.929±3.17 8.520±2.67
ENST00000426306 2.517±0.00 10.157±0.00 N/A 2.170±0.00 3.518±0.00 5.891±0.00 0.740±0.00 0.912±0.00 2.797±0.00 2.700±2.00 4.650±0.00 5.154±0.00 2.646±0.89 4.195±0.00
ENST00000481881 N/A N/A 0.819±0.00 N/A 3.188±0.00 2.619±0.00 N/A N/A 2.145±0.00 1.917±0.00 N/A N/A N/A N/A
ENST00000485576 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.105±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004TF CIL_0004TF_0001 CGP 7:99486519-99534700

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005622 IEA intracellular
GO:0005634 IDA:IEA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000029627 Zkscan14 zinc finger with KRAB and SCAN domains 14 protein_coding Mus_musculus

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