C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004TF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000160908-ENSG00000196652 CGP 9606 7:99486519-99534700
GeneTranscriptPositionBiotype
ENSG00000160908 (ZNF394)
zinc finger protein 394 		ENST00000337673 (ZNF394-001) 99493240-99500297 protein_coding
ENST00000394177 (ZNF394-005) 99494579-99500324 processed_transcript
ENST00000426306 (ZNF394-002) 99493242-99500264 protein_coding
ENST00000462024 (ZNF394-007) 99486519-99498798 processed_transcript
ENST00000464401 (ZNF394-006) 99498585-99499704 retained_intron
ENST00000481881 (ZNF394-004) 99497862-99500275 retained_intron
ENST00000485576 (ZNF394-003) 99498484-99500297 retained_intron
ENSG00000196652 (ZKSCAN5)
zinc finger with KRAB and SCAN domains 5 		ENST00000326775 (ZKSCAN5-005) 99504651-99533784 protein_coding
ENST00000394170 (ZKSCAN5-001) 99504950-99533822 protein_coding
ENST00000451158 (ZKSCAN5-004) 99504675-99532679 protein_coding
ENST00000454175 (ZKSCAN5-002) 99505254-99534700 nonsense_mediated_decay
ENSG00000198556 (ZNF789)
zinc finger protein 789 		ENST00000331410 (ZNF789-004) 99472841-99487594 protein_coding
ENST00000379724 (ZNF789-014) 99472912-99482322 protein_coding
ENST00000447047 (ZNF789-008) 99472911-99486654 nonsense_mediated_decay
ENST00000448667 (ZNF789-003) 99472890-99486800 protein_coding
ENST00000465438 (ZNF789-006) 99472935-99482326 retained_intron
ENST00000468705 (ZNF789-007) 99476240-99479903 retained_intron
ENST00000481108 (ZNF789-010) 99483655-99487004 retained_intron
ENST00000481472 (ZNF789-002) 99472890-99484146 processed_transcript
ENST00000483089 (ZNF789-001) 99472890-99482326 protein_coding
ENST00000488485 (ZNF789-005) 99472892-99481301 retained_intron
ENST00000493485 (ZNF789-012) 99472893-99503650 protein_coding
ENST00000494186 (ZNF789-013) 99484030-99501019 processed_transcript

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0004TF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029627-ENSMUSG00000055991 CGP 10090 5:145194946-145221750
GeneTranscriptPositionBiotype
ENSMUSG00000029627 (Zkscan14)
zinc finger with KRAB and SCAN domains 14 		ENSMUST00000031632 (Zkscan14-001) 145194946-145201868 protein_coding
ENSMUST00000162220 (Zkscan14-002) 145195623-145201857 protein_coding
ENSMUSG00000055991 (Zkscan5)
zinc finger with KRAB and SCAN domains 5 		ENSMUST00000031601 (Zkscan5-002) 145204668-145221750 protein_coding
ENSMUST00000085671 (Zkscan5-001) 145204562-145221750 protein_coding
ENSMUST00000160162 (Zkscan5-006) 145208568-145218296 processed_transcript
ENSMUST00000161881 (Zkscan5-005) 145207634-145218480 protein_coding
ENSMUST00000161896 (Zkscan5-003) 145205123-145218562 nonsense_mediated_decay
ENSMUST00000162168 (Zkscan5-004) 145207604-145218426 nonsense_mediated_decay

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004TF_0001ENSG00000160908ENST00000337673ENST00000394177ENST00000426306ENST00000462024ENST00000464401ENST00000481881ENST00000485576ENSG00000196652ENST00000326775ENST00000394170ENST00000451158ENST00000454175ENSG00000198556ENST00000331410ENST00000379724ENST00000447047ENST00000448667ENST00000465438ENST00000468705ENST00000481108ENST00000481472ENST00000483089ENST00000488485ENST00000493485ENST00000494186CIL_0004TF_0002ENSMUSG00000029627ENSMUST00000031632ENSMUST00000162220ENSMUSG00000055991ENSMUST00000031601ENSMUST00000085671ENSMUST00000160162ENSMUST00000161881ENSMUST00000161896ENSMUST00000162168
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004TF_0001ENSG00000160908ENST00000337673ENST00000426306ENST00000481881ENST00000485576ENSG00000196652ENST00000326775ENST00000394170ENST00000451158ENST00000454175ENSG00000198556ENST00000331410ENST00000465438ENST00000483089ENST00000488485CIL_0004TF_0002ENSMUSG00000029627ENSMUST00000031632ENSMUST00000162220ENSMUSG00000055991ENSMUST00000031601ENSMUST00000085671ENSMUST00000161896
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000160908 ENST00000337673 6.324±0.00 8.865±0.00 1.262±0.00 1.872±1.09 4.167±1.67 4.162±0.97 5.879±0.00 7.112±0.00 1.298±0.06 5.480±4.56 2.042±0.00 6.192±3.29 4.929±3.17 8.520±2.67
ENST00000394177 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000426306 2.517±0.00 10.157±0.00 N/A 2.170±0.00 3.518±0.00 5.891±0.00 0.740±0.00 0.912±0.00 2.797±0.00 2.700±2.00 4.650±0.00 5.154±0.00 2.646±0.89 4.195±0.00
ENST00000462024 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464401 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481881 N/A N/A 0.819±0.00 N/A 3.188±0.00 2.619±0.00 N/A N/A 2.145±0.00 1.917±0.00 N/A N/A N/A N/A
ENST00000485576 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.105±0.00 N/A
ENSG00000196652 ENST00000326775 1.292±0.00 1.110±0.00 N/A 1.006±0.00 N/A 1.127±0.00 0.739±0.00 0.961±0.86 0.265±0.04 1.100±0.00 0.816±0.58 2.137±0.93 1.002±0.20 4.070±1.43
ENST00000394170 N/A 0.567±0.00 N/A 0.752±0.41 1.234±0.00 N/A N/A 0.376±0.00 0.484±0.00 N/A N/A N/A 1.017±0.93 N/A
ENST00000451158 N/A N/A N/A 0.550±0.00 0.167±0.00 N/A 0.240±0.16 0.121±0.00 N/A N/A 0.188±0.00 N/A N/A 3.898±0.00
ENST00000454175 0.506±0.00 0.603±0.00 0.110±0.00 0.912±0.04 0.856±0.00 N/A 0.406±0.10 0.556±0.44 0.373±0.00 0.307±0.11 0.325±0.09 0.903±0.24 0.442±0.06 1.450±0.00
ENSG00000198556 ENST00000331410 N/A N/A N/A N/A 2.657±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000379724 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000447047 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000448667 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465438 N/A N/A 0.644±0.00 N/A N/A N/A N/A N/A N/A N/A 0.159±0.00 0.942±0.00 N/A 2.602±0.00
ENST00000468705 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481108 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481472 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483089 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.437±0.00 N/A N/A N/A N/A
ENST00000488485 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.210±0.00 N/A N/A 4.553±0.85
ENST00000493485 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494186 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029627 ENSMUST00000031632 1.721±0.43 0.751±0.31 2.886±0.11 3.090±1.36 1.257±0.26 1.416±0.19 0.972±0.15 1.501±0.46 1.332±0.47 1.779±0.24 3.223±0.44 1.897±0.98 2.811±0.99 1.713±0.52
ENSMUST00000162220 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.034±0.00 N/A N/A
ENSMUSG00000055991 ENSMUST00000031601 1.550±0.14 0.765±0.15 1.001±0.00 1.076±0.13 1.268±0.28 1.462±0.50 0.510±0.26 1.155±0.73 0.580±0.15 0.477±0.00 0.438±0.00 1.809±0.78 1.324±0.55 2.257±0.00
ENSMUST00000085671 1.640±0.27 0.889±0.53 2.214±0.26 2.321±0.58 1.144±0.00 1.277±0.57 0.890±0.43 1.225±0.48 1.032±0.24 0.490±0.18 2.371±0.49 1.942±0.95 1.915±0.92 3.555±0.99
ENSMUST00000160162 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161881 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161896 N/A 1.167±0.00 N/A N/A 0.660±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162168 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Loading