C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tonsoku-like, DNA repair protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000160949 TONSL 9606 - 8:144428775-144444444 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000409379 TONSL-001 144428808-144444444 protein_coding
  ENST00000497613 TONSL-002 144428775-144442856 retained_intron
  ENST00000613741 TONSL-201 144436605-144443347 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000409379ENST00000497613ENST00000613741
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000409379 0.253±0.00 0.660±0.00 0.371±0.00 0.133±0.09 0.690±0.00 0.561±0.00 0.609±0.00 0.162±0.13 0.220±0.00 0.167±0.00 3.832±2.81 2.046±0.47 2.201±0.67
ENST00000497613 N/A N/A N/A N/A N/A 0.196±0.00 0.019±0.00 0.105±0.00 N/A N/A 1.031±0.24 N/A N/A
ENST00000613741 N/A N/A 0.127±0.00 N/A N/A 0.496±0.00 N/A 0.056±0.00 N/A 0.097±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SS CIL_0007SS_0001 VISTA 8:143880613-144482307
CIL_00026P CIL_00026P_0001 CGP 8:144428775-144465677

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000724 IMP double-strand break repair via homologous recombination
GO:0003714 TAS transcription corepressor activity
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005662 IDA DNA replication factor A complex
GO:0005737 IEA cytoplasm
GO:0031297 IMP replication fork processing
GO:0035101 IDA FACT complex
GO:0042393 IDA histone binding
GO:0042555 IDA MCM complex
GO:0042994 TAS cytoplasmic sequestering of transcription factor
GO:0043596 IDA nuclear replication fork
GO:2001141 TAS regulation of RNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000071294 TONSL tonsoku-like, DNA repair protein protein_coding Danio_rerio
ENSMUSG00000059323 Tonsl tonsoku-like, DNA repair protein protein_coding Mus_musculus

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