C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: melanoma associated antigen (mutated) 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000160953 MUM1 9606 + 19:1354711-1378431 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000415183 MUM1-014 1356364-1377094 protein_coding
  ENST00000585399 MUM1-011 1369104-1370778 retained_intron
  ENST00000586067 MUM1-012 1371323-1376865 processed_transcript
  ENST00000586996 MUM1-010 1361896-1366351 retained_intron
  ENST00000587460 MUM1-002 1356364-1377094 nonsense_mediated_decay
  ENST00000588810 MUM1-008 1356317-1360606 nonsense_mediated_decay
  ENST00000588888 MUM1-015 1373507-1376917 processed_transcript
  ENST00000590695 MUM1-005 1354922-1360631 retained_intron
  ENST00000590866 MUM1-004 1354972-1359894 retained_intron
  ENST00000591337 MUM1-009 1354977-1360711 protein_coding
  ENST00000591433 MUM1-003 1356290-1371479 nonsense_mediated_decay
  ENST00000591453 MUM1-006 1373507-1378428 processed_transcript
  ENST00000591627 MUM1-013 1372099-1376917 retained_intron
  ENST00000591806 MUM1-001 1356314-1378431 protein_coding
  ENST00000592374 MUM1-007 1354711-1357094 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000415183ENST00000586067ENST00000586996ENST00000587460ENST00000588810ENST00000590695ENST00000590866ENST00000591433ENST00000591806
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000415183 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 34.565±0.00
ENST00000586067 N/A N/A N/A 17.303±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586996 N/A N/A N/A N/A N/A N/A N/A N/A 3.445±0.00 N/A 2.807±0.00 N/A N/A N/A
ENST00000587460 N/A N/A N/A N/A 1.539±0.00 N/A 0.410±0.00 N/A N/A N/A N/A 1.079±0.00 N/A 6.843±0.00
ENST00000588810 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.890±0.00 N/A N/A N/A
ENST00000590695 N/A N/A 2.646±0.00 N/A N/A 1.304±0.00 0.176±0.00 N/A N/A 0.884±0.00 0.416±0.00 N/A N/A N/A
ENST00000590866 N/A N/A N/A N/A 1.836±0.00 N/A 0.293±0.00 N/A N/A N/A 0.552±0.00 N/A N/A N/A
ENST00000591433 3.458±0.00 2.256±0.00 N/A N/A N/A N/A N/A N/A 1.269±0.00 2.463±0.00 N/A N/A N/A N/A
ENST00000591806 5.557±0.00 4.241±0.00 1.398±0.00 12.512±7.79 8.491±7.45 4.118±3.04 1.489±1.39 5.484±3.08 3.659±3.02 2.428±1.95 3.803±0.00 13.322±10.88 6.473±0.89 23.133±8.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000QY CIL_0000QY_0001 CGP 19:1286154-1378431
CIL_0000QX CIL_0000QX_0001 CGP 19:1354711-1395589

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006281 IMP DNA repair
GO:0006325 IMP chromatin organization
GO:0031491 IDA nucleosome binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060395 MUM1L1 melanoma associated antigen (mutated) 1-like 1 protein_coding Danio_rerio
ENSMUSG00000020156 Mum1 melanoma associated antigen (mutated) 1 protein_coding Mus_musculus

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