C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: melanoma associated antigen (mutated) 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000591806 MUM1-001 ENSG00000160953 9606 + 19:1356314-1378431 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000591806
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000591806 5.557±0.00 4.241±0.00 1.398±0.00 12.512±7.79 8.491±7.45 4.118±3.04 1.489±1.39 5.484±3.08 3.659±3.02 2.428±1.95 3.803±0.00 13.322±10.88 6.473±0.89 23.133±8.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000QY CIL_0000QY_0001 CGP 19:1286154-1378431
CIL_0000QX CIL_0000QX_0001 CGP 19:1354711-1395589

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006281 IMP DNA repair
GO:0006325 IMP chromatin organization
GO:0031491 IDA nucleosome binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000141962 Mum1-005 retained_intron Mus_musculus 2.99878e-43 182
ENSMUST00000130260 Mum1-002 protein_coding Mus_musculus 2.99878e-43 182
ENSMUST00000020365 Mum1-001 protein_coding Mus_musculus 2.99878e-43 182
ENSMUST00000139431 Mum1-004 retained_intron Mus_musculus 4e-32 145
ENSMUST00000125784 Mum1-003 retained_intron Mus_musculus 4e-32 145

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