C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: melanoma associated antigen (mutated) 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020156 Mum1 10090 + 10:80226434-80243903 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000020365 Mum1-001 80226434-80243903 protein_coding
  ENSMUST00000125784 Mum1-003 80226655-80243900 retained_intron
  ENSMUST00000126917 Mum1-010 80241538-80243900 retained_intron
  ENSMUST00000130260 Mum1-002 80226672-80232680 protein_coding
  ENSMUST00000135598 Mum1-006 80234195-80237114 retained_intron
  ENSMUST00000136208 Mum1-007 80236111-80240392 retained_intron
  ENSMUST00000136791 Mum1-011 80242612-80243900 processed_transcript
  ENSMUST00000138801 Mum1-009 80234194-80243903 retained_intron
  ENSMUST00000139431 Mum1-004 80226751-80229171 retained_intron
  ENSMUST00000141962 Mum1-005 80226680-80243898 retained_intron
  ENSMUST00000146538 Mum1-008 80234260-80243901 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020365ENSMUST00000125784ENSMUST00000138801ENSMUST00000141962ENSMUST00000146538
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020365 9.935±2.27 3.250±0.00 7.278±2.27 7.851±2.30 5.464±0.37 N/A 2.514±0.74 4.266±1.56 4.939±3.52 3.451±0.15 4.463±0.52 7.598±3.00 8.663±3.87 73.470±34.26
ENSMUST00000125784 6.412±0.40 5.300±0.88 3.211±0.59 3.736±1.68 4.671±1.46 4.441±0.66 1.469±0.29 2.490±0.55 2.427±1.41 6.364±0.39 1.666±0.25 6.617±2.04 3.220±1.22 N/A
ENSMUST00000138801 1.461±0.17 0.825±0.14 0.850±0.01 1.140±0.00 1.220±0.25 0.815±0.09 0.294±0.03 0.505±0.03 0.182±0.00 1.165±0.13 N/A 1.354±0.38 0.495±0.00 N/A
ENSMUST00000141962 4.871±1.18 2.594±0.40 2.414±0.12 3.283±0.00 3.898±1.50 4.431±1.11 1.113±0.01 2.139±0.53 1.256±0.68 4.384±0.59 N/A 7.254±2.82 2.693±0.81 N/A
ENSMUST00000146538 4.565±0.48 3.096±0.25 1.792±0.22 2.770±1.02 3.752±1.10 3.184±0.57 1.086±0.20 1.606±0.49 1.133±0.70 3.562±0.58 0.853±0.09 4.332±1.33 1.637±0.21 14.773±2.87

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000QY CIL_0000QY_0002 CGP 10:80179482-80243903
CIL_0000QX CIL_0000QX_0002 CGP 10:80226434-80256794

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0006281 ISS DNA repair
GO:0006325 ISS chromatin organization
GO:0031491 ISS nucleosome binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060395 MUM1L1 melanoma associated antigen (mutated) 1-like 1 protein_coding Danio_rerio
ENSG00000160953 MUM1 melanoma associated antigen (mutated) 1 protein_coding Homo_sapiens

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