C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RecQ protein-like 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000160957 RECQL4 9606 - 8:144511288-144517845 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000301323 RECQL4-013 144511294-144512713 nonsense_mediated_decay
  ENST00000524998 RECQL4-005 144515858-144517499 protein_coding
  ENST00000529424 RECQL4-009 144511390-144512373 processed_transcript
  ENST00000531875 RECQL4-011 144511325-144512772 protein_coding
  ENST00000532846 RECQL4-007 144513571-144516003 protein_coding
  ENST00000534270 RECQL4-003 144516833-144517572 retained_intron
  ENST00000534538 RECQL4-004 144516245-144517628 nonsense_mediated_decay
  ENST00000534626 RECQL4-008 144512453-144514514 protein_coding
  ENST00000617875 RECQL4-002 144511291-144517826 protein_coding
  ENST00000621189 RECQL4-001 144511288-144517845 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000301323ENST00000524998ENST00000531875ENST00000532846ENST00000534538ENST00000534626ENST00000617875ENST00000621189
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000301323 0.555±0.00 N/A N/A N/A 1.325±0.00 N/A N/A 1.112±0.90 N/A N/A N/A 2.621±1.61 N/A 5.402±0.00
ENST00000524998 N/A N/A N/A N/A N/A N/A 0.436±0.00 N/A N/A N/A 0.369±0.00 N/A N/A N/A
ENST00000531875 N/A 0.786±0.00 N/A 0.501±0.00 0.697±0.00 N/A N/A N/A 0.484±0.00 N/A N/A N/A N/A N/A
ENST00000532846 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.149±0.00 N/A 1.429±0.00 N/A N/A
ENST00000534538 N/A N/A 0.269±0.00 N/A N/A N/A N/A N/A 0.779±0.00 N/A 0.375±0.00 N/A N/A N/A
ENST00000534626 N/A N/A N/A 0.426±0.00 N/A 0.624±0.00 0.374±0.00 N/A 0.171±0.00 N/A N/A 7.096±0.00 1.641±0.00 11.585±0.00
ENST00000617875 N/A N/A N/A 0.457±0.00 N/A N/A 0.274±0.00 0.772±0.00 0.267±0.00 N/A N/A 2.467±1.29 N/A 2.181±0.00
ENST00000621189 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.962±0.00 0.665±0.00 1.331±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000VY CIL_0000VY_0001 CGP 8:144509074-144517845
CIL_0000VX CIL_0000VX_0001 CGP 8:144511288-144525178

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001501 IEA skeletal system development
GO:0003676 IEA nucleic acid binding
GO:0005524 IEA ATP binding
GO:0006310 IEA DNA recombination
GO:0008026 IEA ATP-dependent helicase activity
GO:0008284 IEA positive regulation of cell proliferation
GO:0043473 IEA pigmentation
GO:0045875 IEA negative regulation of sister chromatid cohesion
GO:0048705 IEA skeletal system morphogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077516 RECQL4 RecQ protein-like 4 protein_coding Danio_rerio
ENSMUSG00000033762 Recql4 RecQ protein-like 4 protein_coding Mus_musculus

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