C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000VX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000160957-ENSG00000160959 CGP 9606 8:144511288-144525178
GeneTranscriptPositionBiotype
ENSG00000160957 (RECQL4)
RecQ protein-like 4 		ENST00000301323 (RECQL4-013) 144511294-144512713 nonsense_mediated_decay
ENST00000524998 (RECQL4-005) 144515858-144517499 protein_coding
ENST00000529424 (RECQL4-009) 144511390-144512373 processed_transcript
ENST00000531875 (RECQL4-011) 144511325-144512772 protein_coding
ENST00000532846 (RECQL4-007) 144513571-144516003 protein_coding
ENST00000534270 (RECQL4-003) 144516833-144517572 retained_intron
ENST00000534538 (RECQL4-004) 144516245-144517628 nonsense_mediated_decay
ENST00000534626 (RECQL4-008) 144512453-144514514 protein_coding
ENST00000617875 (RECQL4-002) 144511291-144517826 protein_coding
ENST00000621189 (RECQL4-001) 144511288-144517845 protein_coding
ENSG00000160959 (LRRC14)
leucine rich repeat containing 14 		ENST00000292524 (LRRC14-001) 144518007-144525178 protein_coding
ENST00000525766 (LRRC14-005) 144518745-144520387 protein_coding
ENST00000527730 (LRRC14-003) 144517992-144520811 protein_coding
ENST00000528528 (LRRC14-008) 144522582-144524446 processed_transcript
ENST00000529022 (LRRC14-002) 144518005-144522024 protein_coding
ENST00000529995 (LRRC14-009) 144523663-144524871 processed_transcript
ENST00000530242 (LRRC14-007) 144523272-144524291 processed_transcript
ENST00000530854 (LRRC14-004) 144518371-144519985 protein_coding
ENST00000531310 (LRRC14-006) 144519267-144520822 retained_intron
ENSG00000254402 (LRRC24)
leucine rich repeat containing 24 		ENST00000529415 (LRRC24-001) 144522377-144527018 protein_coding
ENST00000533758 (LRRC24-002) 144522439-144527032 protein_coding
ENSG00000265393 (CTD-2517M22.17)
 ENST00000580385 (CTD-2517M22.17-001) 144512567-144513672 antisense
CIL_0000VX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000033762-ENSMUSG00000033728 CGP 10090 15:76703553-76717699
GeneTranscriptPositionBiotype
ENSMUSG00000019080 (Mfsd3)
major facilitator superfamily domain containing 3 		ENSMUST00000019224 (Mfsd3-201) 76701542-76704239 protein_coding
ENSMUSG00000033707 (Lrrc24)
leucine rich repeat containing 24 		ENSMUST00000036247 (Lrrc24-201) 76721466-76723845 protein_coding
ENSMUST00000049956 (Lrrc24-001) 76715276-76722173 protein_coding
ENSMUST00000146725 (Lrrc24-002) 76719628-76722159 retained_intron
ENSMUST00000146855 (Lrrc24-003) 76716207-76718416 retained_intron
ENSMUSG00000033728 (Lrrc14)
leucine rich repeat containing 14 		ENSMUST00000036423 (Lrrc14-002) 76710639-76715035 protein_coding
ENSMUST00000127208 (Lrrc14-001) 76710638-76717699 protein_coding
ENSMUST00000136840 (Lrrc14-008) 76710623-76713570 protein_coding
ENSMUST00000137649 (Lrrc14-004) 76710643-76715084 protein_coding
ENSMUST00000138132 (Lrrc14-010) 76710673-76714749 processed_transcript
ENSMUST00000142506 (Lrrc14-006) 76710673-76716648 retained_intron
ENSMUST00000142610 (Lrrc14-005) 76710643-76715052 nonsense_mediated_decay
ENSMUST00000154531 (Lrrc14-007) 76710663-76715130 retained_intron
ENSMUST00000155225 (Lrrc14-009) 76710649-76712923 protein_coding
ENSMUST00000155735 (Lrrc14-003) 76710731-76715091 protein_coding
ENSMUSG00000033762 (Recql4)
RecQ protein-like 4 		ENSMUST00000036852 (Recql4-201) 76703553-76710559 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000VX_0001ENSG00000160957ENST00000301323ENST00000524998ENST00000529424ENST00000531875ENST00000532846ENST00000534270ENST00000534538ENST00000534626ENST00000617875ENST00000621189ENSG00000160959ENST00000292524ENST00000525766ENST00000527730ENST00000528528ENST00000529022ENST00000529995ENST00000530242ENST00000530854ENST00000531310ENSG00000254402ENST00000529415ENST00000533758ENSG00000265393ENST00000580385CIL_0000VX_0002ENSMUSG00000019080ENSMUST00000019224ENSMUSG00000033707ENSMUST00000036247ENSMUST00000049956ENSMUST00000146725ENSMUST00000146855ENSMUSG00000033728ENSMUST00000036423ENSMUST00000127208ENSMUST00000136840ENSMUST00000137649ENSMUST00000138132ENSMUST00000142506ENSMUST00000142610ENSMUST00000154531ENSMUST00000155225ENSMUST00000155735ENSMUSG00000033762ENSMUST00000036852
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000VX_0001ENSG00000160957ENST00000301323ENST00000524998ENST00000531875ENST00000532846ENST00000534538ENST00000534626ENST00000617875ENST00000621189ENSG00000160959ENST00000292524ENST00000528528ENST00000529022ENST00000530854ENSG00000254402ENST00000529415ENST00000533758ENSG00000265393ENST00000580385CIL_0000VX_0002ENSMUSG00000019080ENSMUST00000019224ENSMUSG00000033707ENSMUST00000036247ENSMUST00000049956ENSMUSG00000033728ENSMUST00000036423ENSMUST00000127208ENSMUST00000137649ENSMUST00000142610ENSMUST00000154531ENSMUST00000155225ENSMUST00000155735ENSMUSG00000033762ENSMUST00000036852
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000160957 ENST00000301323 0.555±0.00 N/A N/A N/A 1.325±0.00 N/A N/A 1.112±0.90 N/A N/A N/A 2.621±1.61 N/A 5.402±0.00
ENST00000524998 N/A N/A N/A N/A N/A N/A 0.436±0.00 N/A N/A N/A 0.369±0.00 N/A N/A N/A
ENST00000529424 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531875 N/A 0.786±0.00 N/A 0.501±0.00 0.697±0.00 N/A N/A N/A 0.484±0.00 N/A N/A N/A N/A N/A
ENST00000532846 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.149±0.00 N/A 1.429±0.00 N/A N/A
ENST00000534270 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534538 N/A N/A 0.269±0.00 N/A N/A N/A N/A N/A 0.779±0.00 N/A 0.375±0.00 N/A N/A N/A
ENST00000534626 N/A N/A N/A 0.426±0.00 N/A 0.624±0.00 0.374±0.00 N/A 0.171±0.00 N/A N/A 7.096±0.00 1.641±0.00 11.585±0.00
ENST00000617875 N/A N/A N/A 0.457±0.00 N/A N/A 0.274±0.00 0.772±0.00 0.267±0.00 N/A N/A 2.467±1.29 N/A 2.181±0.00
ENST00000621189 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.962±0.00 0.665±0.00 1.331±0.00
ENSG00000160959 ENST00000292524 1.616±0.00 3.796±0.00 N/A 4.183±3.70 2.924±0.00 1.687±0.00 2.793±0.00 2.949±0.00 N/A N/A N/A 5.475±1.43 2.047±0.67 4.279±0.70
ENST00000525766 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527730 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528528 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.288±0.00
ENST00000529022 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.049±0.00 N/A 2.556±0.46 N/A
ENST00000529995 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530242 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530854 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.545±0.00 N/A N/A N/A
ENST00000531310 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000254402 ENST00000529415 N/A N/A N/A 1.313±0.00 N/A N/A N/A N/A N/A 1.287±0.00 N/A N/A 4.563±0.00 N/A
ENST00000533758 N/A 8.657±0.00 N/A N/A N/A N/A N/A N/A N/A 8.030±0.00 N/A 6.620±4.63 N/A 11.526±0.00
ENSG00000265393 ENST00000580385 N/A N/A 0.251±0.00 1.875±0.57 N/A N/A N/A N/A 0.838±0.00 N/A N/A 2.698±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000019080 ENSMUST00000019224 5.795±0.80 20.050±4.30 3.616±0.69 2.007±1.29 8.060±3.41 4.366±1.30 3.265±0.66 4.950±1.43 6.359±2.66 3.945±0.39 2.968±1.06 7.071±3.60 1.558±0.16 2.236±0.07
ENSMUSG00000033707 ENSMUST00000036247 31.727±6.86 93.381±23.40 22.290±2.44 8.459±4.15 41.155±13.69 9.955±1.53 29.969±5.98 31.704±4.42 18.013±6.54 16.004±1.56 21.908±2.53 23.259±9.35 3.030±0.14 3.554±0.12
ENSMUST00000049956 N/A N/A N/A 14.222±5.49 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.973±1.74
ENSMUST00000146725 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146855 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000033728 ENSMUST00000036423 7.271±1.10 N/A 5.850±0.41 2.635±0.00 7.124±0.00 3.461±0.33 N/A 5.111±0.30 3.946±1.35 4.629±0.97 N/A 7.946±3.48 3.967±1.20 3.309±0.34
ENSMUST00000127208 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.496±0.00 0.674±0.39
ENSMUST00000136840 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137649 N/A N/A N/A 2.378±0.18 N/A 2.179±0.09 N/A N/A 2.271±0.04 3.063±0.00 N/A 4.644±2.27 2.377±0.66 2.246±0.26
ENSMUST00000138132 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142506 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142610 N/A N/A N/A 3.902±0.67 6.489±0.00 3.499±0.30 N/A N/A 3.162±0.00 4.609±0.15 4.525±0.00 8.555±2.28 3.089±0.84 3.143±0.43
ENSMUST00000154531 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.377±0.80 0.612±0.00
ENSMUST00000155225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.096±0.00
ENSMUST00000155735 N/A N/A N/A N/A N/A 3.385±0.00 N/A N/A N/A N/A N/A 4.878±2.21 3.158±1.13 1.108±0.00
ENSMUSG00000033762 ENSMUST00000036852 1.475±0.41 N/A 0.632±0.12 2.026±1.68 1.327±0.35 1.472±0.59 0.319±0.03 0.415±0.00 6.592±6.89 0.669±0.04 0.175±0.00 2.200±0.75 1.382±0.85 4.812±2.08

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