C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: acyl-CoA oxidase 1, palmitoyl
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000161533 ACOX1 9606 - 17:75941507-75979363 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000293217 ACOX1-001 75941507-75979363 protein_coding
  ENST00000301608 ACOX1-002 75946577-75979134 protein_coding
  ENST00000572047 ACOX1-004 75946464-75979073 nonsense_mediated_decay
  ENST00000573078 ACOX1-003 75946530-75979128 nonsense_mediated_decay
  ENST00000576743 ACOX1-005 75973309-75978693 protein_coding
  ENST00000587927 ACOX1-009 75942878-75949359 protein_coding
  ENST00000588176 ACOX1-012 75955908-75979177 protein_coding
  ENST00000588968 ACOX1-014 75942596-75949532 protein_coding
  ENST00000589301 ACOX1-007 75957515-75979128 nonsense_mediated_decay
  ENST00000589744 ACOX1-011 75953249-75955589 retained_intron
  ENST00000591857 ACOX1-010 75955861-75979091 processed_transcript
  ENST00000591963 ACOX1-013 75942879-75943576 processed_transcript
  ENST00000592329 ACOX1-008 75978467-75979045 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000293217ENST00000301608ENST00000573078
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000293217 15.507±0.00 6.832±0.00 6.289±0.00 7.668±2.11 19.235±16.50 5.865±0.05 7.871±3.15 13.972±6.26 7.864±0.61 4.692±1.72 8.486±6.79 5.070±1.94 5.638±1.85 5.351±2.93
ENST00000301608 N/A N/A N/A N/A 3.522±0.00 6.370±0.00 3.041±0.00 21.663±0.00 4.848±0.00 N/A 2.318±0.00 N/A 4.464±0.47 N/A
ENST00000573078 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.921±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WF CIL_0008WF_0001 VISTA 17:75822026-76422503
CIL_00078W CIL_00078W_0001 CGP 17:75909574-75979363
CIL_00078M CIL_00078M_0001 CGP 17:75941507-76000586

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000038 IMP very long-chain fatty acid metabolic process
GO:0003995 IEA acyl-CoA dehydrogenase activity
GO:0003997 IGI:IEA acyl-CoA oxidase activity
GO:0005102 IPI receptor binding
GO:0005504 IEA fatty acid binding
GO:0005737 IEA cytoplasm
GO:0005739 IEA mitochondrion
GO:0005777 IDA:IEA peroxisome
GO:0005778 IEA peroxisomal membrane
GO:0005782 TAS peroxisomal matrix
GO:0006091 IMP generation of precursor metabolites and energy
GO:0006629 IDA lipid metabolic process
GO:0006631 IEA fatty acid metabolic process
GO:0006635 IEA fatty acid beta-oxidation
GO:0006693 IMP prostaglandin metabolic process
GO:0007283 IEA spermatogenesis
GO:0008152 IEA metabolic process
GO:0016020 IDA membrane
GO:0016401 IDA palmitoyl-CoA oxidase activity
GO:0016559 IGI peroxisome fission
GO:0016627 IEA oxidoreductase activity, acting on the CH-CH group of donors
GO:0019395 IGI fatty acid oxidation
GO:0030165 IDA PDZ domain binding
GO:0033540 IEA fatty acid beta-oxidation using acyl-CoA oxidase
GO:0033559 TAS unsaturated fatty acid metabolic process
GO:0036109 TAS alpha-linolenic acid metabolic process
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0047485 IPI protein N-terminus binding
GO:0050660 IEA flavin adenine dinucleotide binding
GO:0055088 IDA lipid homeostasis
GO:0055114 IEA oxidation-reduction process
GO:0071949 IDA FAD binding
GO:2000189 IGI positive regulation of cholesterol homeostasis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014727 acox1 acyl-Coenzyme A oxidase 1, palmitoyl protein_coding Danio_rerio
ENSMUSG00000020777 Acox1 acyl-Coenzyme A oxidase 1, palmitoyl protein_coding Mus_musculus

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