C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: acyl-CoA oxidase 1, palmitoyl
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000293217 ACOX1-001 ENSG00000161533 9606 - 17:75941507-75979363 protein_coding

Homo sapiens EnsemblGRCh38

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Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000293217
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000293217 15.507±0.00 6.832±0.00 6.289±0.00 7.668±2.11 19.235±16.50 5.865±0.05 7.871±3.15 13.972±6.26 7.864±0.61 4.692±1.72 8.486±6.79 5.070±1.94 5.638±1.85 5.351±2.93

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WF CIL_0008WF_0001 VISTA 17:75822026-76422503
CIL_00078W CIL_00078W_0001 CGP 17:75909574-75979363
CIL_00078M CIL_00078M_0001 CGP 17:75941507-76000586

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000038 IMP very long-chain fatty acid metabolic process
GO:0003995 IEA acyl-CoA dehydrogenase activity
GO:0003997 IGI:IEA acyl-CoA oxidase activity
GO:0005102 IPI receptor binding
GO:0005504 IEA fatty acid binding
GO:0005737 IEA cytoplasm
GO:0005739 IEA mitochondrion
GO:0005777 IDA:IEA peroxisome
GO:0005778 IEA peroxisomal membrane
GO:0005782 TAS peroxisomal matrix
GO:0006091 IMP generation of precursor metabolites and energy
GO:0006629 IDA lipid metabolic process
GO:0006631 IEA fatty acid metabolic process
GO:0006635 IEA fatty acid beta-oxidation
GO:0006693 IMP prostaglandin metabolic process
GO:0007283 IEA spermatogenesis
GO:0008152 IEA metabolic process
GO:0016020 IDA membrane
GO:0016401 IDA palmitoyl-CoA oxidase activity
GO:0016559 IGI peroxisome fission
GO:0016627 IEA oxidoreductase activity, acting on the CH-CH group of donors
GO:0019395 IGI fatty acid oxidation
GO:0030165 IDA PDZ domain binding
GO:0033540 IEA fatty acid beta-oxidation using acyl-CoA oxidase
GO:0033559 TAS unsaturated fatty acid metabolic process
GO:0036109 TAS alpha-linolenic acid metabolic process
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0047485 IPI protein N-terminus binding
GO:0050660 IEA flavin adenine dinucleotide binding
GO:0055088 IDA lipid homeostasis
GO:0055114 IEA oxidation-reduction process
GO:0071949 IDA FAD binding
GO:2000189 IGI positive regulation of cholesterol homeostasis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000066587 Acox1-001 protein_coding Mus_musculus 0 1932
ENSMUST00000072948 Acox1-002 protein_coding Mus_musculus 0 1666
ENSMUST00000148601 Acox1-003 protein_coding Mus_musculus 0 1652
ENSMUST00000130229 Acox1-004 processed_transcript Mus_musculus 0 924
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.0000008 62

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