C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00078W_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000188878-ENSG00000161533 CGP 9606 17:75909574-75979363
GeneTranscriptPositionBiotype
ENSG00000161533 (ACOX1)
acyl-CoA oxidase 1, palmitoyl 		ENST00000293217 (ACOX1-001) 75941507-75979363 protein_coding
ENST00000301608 (ACOX1-002) 75946577-75979134 protein_coding
ENST00000572047 (ACOX1-004) 75946464-75979073 nonsense_mediated_decay
ENST00000573078 (ACOX1-003) 75946530-75979128 nonsense_mediated_decay
ENST00000576743 (ACOX1-005) 75973309-75978693 protein_coding
ENST00000587927 (ACOX1-009) 75942878-75949359 protein_coding
ENST00000588176 (ACOX1-012) 75955908-75979177 protein_coding
ENST00000588968 (ACOX1-014) 75942596-75949532 protein_coding
ENST00000589301 (ACOX1-007) 75957515-75979128 nonsense_mediated_decay
ENST00000589744 (ACOX1-011) 75953249-75955589 retained_intron
ENST00000591857 (ACOX1-010) 75955861-75979091 processed_transcript
ENST00000591963 (ACOX1-013) 75942879-75943576 processed_transcript
ENST00000592329 (ACOX1-008) 75978467-75979045 retained_intron
ENSG00000188878 (FBF1)
Fas (TNFRSF6) binding factor 1 		ENST00000319129 (FBF1-201) 75910537-75941038 protein_coding
ENST00000389570 (FBF1-202) 75909844-75941025 protein_coding
ENST00000585990 (FBF1-002) 75909844-75941140 retained_intron
ENST00000586112 (FBF1-008) 75913479-75914140 retained_intron
ENST00000586631 (FBF1-004) 75937712-75940947 protein_coding
ENST00000586717 (FBF1-001) 75909574-75941038 protein_coding
ENST00000586838 (FBF1-005) 75920273-75923473 nonsense_mediated_decay
ENST00000588283 (FBF1-007) 75912191-75917761 nonsense_mediated_decay
ENST00000588478 (FBF1-010) 75938173-75941056 processed_transcript
ENST00000590264 (FBF1-009) 75909581-75913780 protein_coding
ENST00000592193 (FBF1-003) 75910723-75937594 protein_coding
ENST00000593076 (FBF1-006) 75914035-75915043 retained_intron
ENSG00000257949 (TEN1)
TEN1 CST complex subunit 		ENST00000397640 (TEN1-001) 75979220-76000586 protein_coding
ENST00000585710 (TEN1-004) 75986137-75991572 retained_intron
ENST00000586891 (TEN1-003) 75979271-75991568 protein_coding
ENST00000588202 (TEN1-005) 75979241-76000521 protein_coding
ENST00000590676 (TEN1-002) 75979268-75991540 protein_coding
CIL_00078W_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020776-ENSMUSG00000020777 CGP 10090 11:116142285-116199045
GeneTranscriptPositionBiotype
ENSMUSG00000020776 (Fbf1)
Fas (TNFRSF6) binding factor 1 		ENSMUST00000103031 (Fbf1-001) 116142285-116168153 protein_coding
ENSMUST00000106435 (Fbf1-201) 116142286-116165914 protein_coding
ENSMUST00000124828 (Fbf1-003) 116155086-116168154 protein_coding
ENSMUST00000125980 (Fbf1-004) 116143242-116150795 processed_transcript
ENSMUST00000126861 (Fbf1-005) 116142285-116147139 processed_transcript
ENSMUST00000131521 (Fbf1-008) 116155977-116165883 processed_transcript
ENSMUST00000136073 (Fbf1-012) 116165783-116167765 retained_intron
ENSMUST00000136318 (Fbf1-002) 116142285-116167780 processed_transcript
ENSMUST00000139020 (Fbf1-006) 116164680-116168148 protein_coding
ENSMUST00000143038 (Fbf1-009) 116154750-116158893 processed_transcript
ENSMUST00000148350 (Fbf1-011) 116163329-116168166 processed_transcript
ENSMUST00000150703 (Fbf1-010) 116154719-116157490 processed_transcript
ENSMUSG00000020777 (Acox1)
acyl-Coenzyme A oxidase 1, palmitoyl 		ENSMUST00000066587 (Acox1-001) 116171888-116199045 protein_coding
ENSMUST00000072948 (Acox1-002) 116171888-116198801 protein_coding
ENSMUST00000124684 (Acox1-005) 116189029-116198729 processed_transcript
ENSMUST00000128793 (Acox1-006) 116179720-116182416 processed_transcript
ENSMUST00000130229 (Acox1-004) 116171888-116182266 processed_transcript
ENSMUST00000148601 (Acox1-003) 116171888-116189575 protein_coding
ENSMUST00000150549 (Acox1-007) 116175343-116181214 processed_transcript
ENSMUSG00000020778 (Ten1)
TEN1 telomerase capping complex subunit 		ENSMUST00000021130 (Ten1-001) 116198855-116215318 protein_coding
ENSMUST00000124663 (Ten1-004) 116198898-116206850 retained_intron
ENSMUST00000135460 (Ten1-003) 116210934-116215248 processed_transcript
ENSMUST00000146066 (Ten1-002) 116198959-116215248 processed_transcript
ENSMUSG00000088290 (Gm26413)
predicted gene, 26413 		ENSMUST00000157665 (Gm26413-201) 116163910-116164036 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00078W_0001ENSG00000161533ENST00000293217ENST00000301608ENST00000573078ENSG00000188878ENST00000319129ENST00000585990ENST00000586631ENST00000586717ENST00000592193ENST00000593076ENSG00000257949ENST00000397640CIL_00078W_0002ENSMUSG00000020776ENSMUST00000103031ENSMUST00000106435ENSMUST00000125980ENSMUST00000136318ENSMUST00000143038ENSMUST00000148350ENSMUSG00000020777ENSMUST00000066587ENSMUST00000072948ENSMUST00000148601ENSMUST00000150549ENSMUSG00000020778ENSMUST00000021130ENSMUST00000124663ENSMUSG00000088290ENSMUST00000157665
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000161533 ENST00000293217 15.507±0.00 6.832±0.00 6.289±0.00 7.668±2.11 19.235±16.50 5.865±0.05 7.871±3.15 13.972±6.26 7.864±0.61 4.692±1.72 8.486±6.79 5.070±1.94 5.638±1.85 5.351±2.93
ENST00000301608 N/A N/A N/A N/A 3.522±0.00 6.370±0.00 3.041±0.00 21.663±0.00 4.848±0.00 N/A 2.318±0.00 N/A 4.464±0.47 N/A
ENST00000572047 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573078 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.921±0.00 N/A N/A N/A
ENST00000576743 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587927 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588176 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588968 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589301 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589744 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591857 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591963 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592329 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000188878 ENST00000319129 N/A N/A 0.204±0.00 0.370±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000389570 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585990 N/A N/A N/A 0.403±0.00 1.776±0.00 N/A N/A 3.786±0.00 0.386±0.00 2.333±0.00 N/A N/A N/A 7.243±0.00
ENST00000586112 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586631 N/A N/A 0.923±0.00 N/A N/A 1.276±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586717 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.272±0.00 N/A 5.316±0.00
ENST00000586838 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588283 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588478 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590264 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592193 N/A N/A N/A N/A 0.257±0.00 0.209±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593076 N/A N/A 0.511±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.352±0.00 N/A N/A
ENSG00000257949 ENST00000397640 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.928±6.74 23.859±2.97 14.248±0.00
ENST00000585710 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586891 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588202 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590676 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020776 ENSMUST00000103031 2.106±0.77 N/A 3.179±0.25 4.195±0.36 1.414±0.00 N/A 0.901±0.03 2.572±0.43 0.706±0.46 2.388±0.00 0.890±0.26 3.003±1.04 2.504±0.67 2.572±0.01
ENSMUST00000106435 3.394±0.68 7.201±2.71 6.529±0.61 13.215±3.28 3.242±0.82 3.399±1.04 1.727±0.35 2.743±0.90 1.249±0.98 6.325±1.64 1.170±0.61 8.712±2.40 3.822±1.76 9.218±1.32
ENSMUST00000124828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125980 N/A N/A N/A N/A N/A 1.649±0.00 N/A N/A 0.638±0.00 N/A N/A 5.294±1.20 1.966±0.00 21.059±0.00
ENSMUST00000126861 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131521 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136073 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136318 N/A N/A N/A N/A 1.138±0.04 0.777±0.06 N/A N/A 0.532±0.24 1.915±0.00 0.614±0.00 2.818±0.44 1.216±0.00 N/A
ENSMUST00000139020 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143038 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 25.499±0.00
ENSMUST00000148350 N/A N/A N/A 34.187±0.00 N/A N/A N/A N/A N/A N/A N/A 42.432±0.00 19.916±2.75 N/A
ENSMUST00000150703 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000020777 ENSMUST00000066587 57.810±33.81 12.666±3.60 11.364±0.37 18.117±2.37 22.673±7.96 11.534±2.92 28.350±2.18 22.636±5.18 33.820±34.49 12.717±1.81 33.615±1.81 9.877±4.57 12.245±1.63 3.424±1.72
ENSMUST00000072948 21.678±0.10 26.543±4.08 10.825±0.99 N/A 24.382±9.20 43.053±7.07 11.225±1.07 94.817±8.28 189.623±155.52 9.438±0.77 N/A 8.767±2.02 12.077±6.04 N/A
ENSMUST00000124684 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128793 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130229 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148601 58.762±27.10 27.572±5.86 13.589±0.00 9.338±1.68 34.763±13.63 17.085±2.18 27.434±4.36 23.129±4.40 86.573±71.66 12.172±3.33 N/A 10.530±3.73 11.404±1.23 4.581±1.57
ENSMUST00000150549 N/A N/A N/A 32.347±0.00 N/A N/A N/A N/A N/A N/A N/A 22.895±0.00 16.328±0.00 3.326±0.00
ENSMUSG00000020778 ENSMUST00000021130 N/A N/A N/A 32.426±9.30 N/A N/A N/A N/A 20.946±1.21 15.749±0.93 N/A 17.496±3.03 N/A 6.680±0.00
ENSMUST00000124663 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.069±0.00
ENSMUST00000135460 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146066 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000088290 ENSMUST00000157665 N/A N/A 11.922±0.00 12.206±3.11 N/A N/A N/A N/A 4.839±0.00 N/A N/A 4.245±0.00 N/A N/A

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