C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 385A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000161642 ZNF385A 9606 - 12:54369133-54391298 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000338010 ZNF385A-001 54369140-54391298 protein_coding
  ENST00000352268 ZNF385A-002 54369135-54391281 protein_coding
  ENST00000394313 ZNF385A-007 54369136-54384723 protein_coding
  ENST00000546919 ZNF385A-011 54371006-54385264 protein_coding
  ENST00000546970 ZNF385A-003 54369153-54385768 protein_coding
  ENST00000547210 ZNF385A-012 54371583-54384723 protein_coding
  ENST00000549937 ZNF385A-015 54371024-54384460 protein_coding
  ENST00000549962 ZNF385A-013 54371491-54391281 protein_coding
  ENST00000550120 ZNF385A-014 54371684-54384709 protein_coding
  ENST00000550774 ZNF385A-010 54371642-54391298 protein_coding
  ENST00000550779 ZNF385A-005 54369140-54384469 nonsense_mediated_decay
  ENST00000551109 ZNF385A-006 54369133-54385767 protein_coding
  ENST00000551771 ZNF385A-008 54370162-54384673 protein_coding
  ENST00000551864 ZNF385A-016 54372914-54381447 processed_transcript
  ENST00000552382 ZNF385A-009 54369878-54379189 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000338010ENST00000352268ENST00000394313ENST00000546919ENST00000547210ENST00000550120ENST00000550774ENST00000550779ENST00000551109ENST00000551771ENST00000552382
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000338010 N/A N/A N/A 1.575±0.00 N/A N/A 1.338±0.00 1.072±0.00 0.581±0.20 N/A N/A 4.220±2.15 14.248±6.41 3.034±0.00
ENST00000352268 N/A 4.808±0.00 N/A 10.603±0.00 N/A N/A N/A 0.039±0.00 N/A 2.002±0.00 N/A 4.387±0.00 15.178±0.00 1.375±0.00
ENST00000394313 N/A N/A N/A 0.493±0.00 0.929±0.00 N/A N/A N/A N/A N/A N/A 1.177±0.00 2.629±0.00 N/A
ENST00000546919 N/A N/A N/A N/A N/A N/A N/A N/A 0.735±0.00 N/A N/A 0.872±0.00 N/A N/A
ENST00000547210 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.389±0.00 N/A N/A N/A
ENST00000550120 N/A N/A N/A N/A N/A 0.549±0.00 N/A 0.684±0.00 N/A 0.385±0.00 N/A N/A N/A N/A
ENST00000550774 N/A N/A N/A N/A N/A 1.080±0.00 N/A N/A 0.740±0.00 N/A N/A 1.540±0.00 N/A N/A
ENST00000550779 14.224±0.00 6.448±0.00 N/A 7.288±0.00 14.515±0.00 4.579±0.00 0.412±0.38 1.030±0.00 N/A 1.720±1.65 N/A 3.686±2.18 8.998±1.83 7.630±0.00
ENST00000551109 3.850±0.00 N/A N/A 17.142±0.00 21.911±0.00 N/A 0.486±0.00 N/A N/A 1.754±0.00 N/A N/A N/A N/A
ENST00000551771 N/A N/A 0.148±0.00 1.077±0.00 N/A N/A 0.113±0.00 N/A N/A 0.379±0.00 0.498±0.00 N/A N/A N/A
ENST00000552382 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.185±0.00 N/A 1.178±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000035 CIL_000035_0001 CGP 12:54362445-54391298
CIL_000031 CIL_000031_0001 CGP 12:54369133-54419460

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000790 IDA nuclear chromatin
GO:0002039 IPI p53 binding
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003730 ISS mRNA 3'-UTR binding
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006915 ISS apoptotic process
GO:0006974 ISS cellular response to DNA damage stimulus
GO:0007599 IEA hemostasis
GO:0007611 IEA learning or memory
GO:0007626 IEA locomotory behavior
GO:0008270 IEA zinc ion binding
GO:0008298 IEA intracellular mRNA localization
GO:0010609 ISS mRNA localization resulting in posttranscriptional regulation of gene expression
GO:0030220 IEA platelet formation
GO:0030425 ISS dendrite
GO:0035855 ISS megakaryocyte development
GO:0043025 ISS neuronal cell body
GO:0044822 IDA poly(A) RNA binding
GO:0045600 ISS positive regulation of fat cell differentiation
GO:0046872 IEA metal ion binding
GO:0070889 IEA platelet alpha granule organization
GO:1902164 IMP positive regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator
GO:1902166 IMP negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
GO:2000765 ISS regulation of cytoplasmic translation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000009899 znf385a zinc finger protein 385A protein_coding Danio_rerio
ENSMUSG00000000552 Zfp385a zinc finger protein 385A protein_coding Mus_musculus

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