C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000031_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000161642-ENSG00000161638 CGP 9606 12:54369133-54419460
GeneTranscriptPositionBiotype
ENSG00000161638 (ITGA5)
integrin, alpha 5 (fibronectin receptor, alpha polypeptide) 		ENST00000293379 (ITGA5-001) 54395261-54419460 protein_coding
ENST00000435631 (ITGA5-002) 54404771-54419220 nonsense_mediated_decay
ENST00000547197 (ITGA5-012) 54395895-54399913 protein_coding
ENST00000547744 (ITGA5-005) 54411908-54413428 processed_transcript
ENST00000549601 (ITGA5-010) 54396222-54398823 retained_intron
ENST00000550141 (ITGA5-007) 54403632-54404344 retained_intron
ENST00000551564 (ITGA5-008) 54402081-54403172 retained_intron
ENST00000551861 (ITGA5-006) 54403916-54404629 retained_intron
ENST00000552387 (ITGA5-013) 54397366-54400858 retained_intron
ENST00000552431 (ITGA5-011) 54397271-54399913 retained_intron
ENST00000552564 (ITGA5-004) 54395261-54406116 retained_intron
ENST00000552583 (ITGA5-009) 54401560-54402272 retained_intron
ENST00000553071 (ITGA5-003) 54405194-54419127 nonsense_mediated_decay
ENSG00000161642 (ZNF385A)
zinc finger protein 385A 		ENST00000338010 (ZNF385A-001) 54369140-54391298 protein_coding
ENST00000352268 (ZNF385A-002) 54369135-54391281 protein_coding
ENST00000394313 (ZNF385A-007) 54369136-54384723 protein_coding
ENST00000546919 (ZNF385A-011) 54371006-54385264 protein_coding
ENST00000546970 (ZNF385A-003) 54369153-54385768 protein_coding
ENST00000547210 (ZNF385A-012) 54371583-54384723 protein_coding
ENST00000549937 (ZNF385A-015) 54371024-54384460 protein_coding
ENST00000549962 (ZNF385A-013) 54371491-54391281 protein_coding
ENST00000550120 (ZNF385A-014) 54371684-54384709 protein_coding
ENST00000550774 (ZNF385A-010) 54371642-54391298 protein_coding
ENST00000550779 (ZNF385A-005) 54369140-54384469 nonsense_mediated_decay
ENST00000551109 (ZNF385A-006) 54369133-54385767 protein_coding
ENST00000551771 (ZNF385A-008) 54370162-54384673 protein_coding
ENST00000551864 (ZNF385A-016) 54372914-54381447 processed_transcript
ENST00000552382 (ZNF385A-009) 54369878-54379189 processed_transcript
CIL_000031_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000000552-ENSMUSG00000000555 CGP 10090 15:103313895-103366763
GeneTranscriptPositionBiotype
ENSMUSG00000000552 (Zfp385a)
zinc finger protein 385A 		ENSMUST00000168828 (Zfp385a-201) 103313895-103340086 protein_coding
ENSMUSG00000000555 (Itga5)
integrin alpha 5 (fibronectin receptor alpha) 		ENSMUST00000023128 (Itga5-201) 103344289-103366763 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000031_0001ENSG00000161638ENST00000293379ENST00000435631ENST00000547197ENST00000547744ENST00000549601ENST00000550141ENST00000551564ENST00000551861ENST00000552387ENST00000552431ENST00000552564ENST00000552583ENST00000553071ENSG00000161642ENST00000338010ENST00000352268ENST00000394313ENST00000546919ENST00000546970ENST00000547210ENST00000549937ENST00000549962ENST00000550120ENST00000550774ENST00000550779ENST00000551109ENST00000551771ENST00000551864ENST00000552382CIL_000031_0002ENSMUSG00000000552ENSMUST00000168828ENSMUSG00000000555ENSMUST00000023128
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000031_0001ENSG00000161638ENST00000293379ENST00000550141ENST00000552387ENST00000552564ENSG00000161642ENST00000338010ENST00000352268ENST00000394313ENST00000546919ENST00000547210ENST00000550120ENST00000550774ENST00000550779ENST00000551109ENST00000551771ENST00000552382CIL_000031_0002ENSMUSG00000000552ENSMUST00000168828ENSMUSG00000000555ENSMUST00000023128
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000161638 ENST00000293379 41.031±0.00 36.868±0.00 0.973±0.00 2.650±2.30 11.762±6.05 28.705±25.23 9.219±6.97 9.119±5.48 18.883±9.85 62.113±56.50 6.993±4.94 16.472±8.78 138.837±52.44 8.459±7.58
ENST00000435631 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547197 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547744 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550141 N/A N/A N/A 0.905±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551564 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551861 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552387 N/A N/A N/A 0.242±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552431 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552564 N/A N/A 0.201±0.00 N/A 1.587±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.355±0.00
ENST00000552583 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553071 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000161642 ENST00000338010 N/A N/A N/A 1.575±0.00 N/A N/A 1.338±0.00 1.072±0.00 0.581±0.20 N/A N/A 4.220±2.15 14.248±6.41 3.034±0.00
ENST00000352268 N/A 4.808±0.00 N/A 10.603±0.00 N/A N/A N/A 0.039±0.00 N/A 2.002±0.00 N/A 4.387±0.00 15.178±0.00 1.375±0.00
ENST00000394313 N/A N/A N/A 0.493±0.00 0.929±0.00 N/A N/A N/A N/A N/A N/A 1.177±0.00 2.629±0.00 N/A
ENST00000546919 N/A N/A N/A N/A N/A N/A N/A N/A 0.735±0.00 N/A N/A 0.872±0.00 N/A N/A
ENST00000546970 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547210 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.389±0.00 N/A N/A N/A
ENST00000549937 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549962 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550120 N/A N/A N/A N/A N/A 0.549±0.00 N/A 0.684±0.00 N/A 0.385±0.00 N/A N/A N/A N/A
ENST00000550774 N/A N/A N/A N/A N/A 1.080±0.00 N/A N/A 0.740±0.00 N/A N/A 1.540±0.00 N/A N/A
ENST00000550779 14.224±0.00 6.448±0.00 N/A 7.288±0.00 14.515±0.00 4.579±0.00 0.412±0.38 1.030±0.00 N/A 1.720±1.65 N/A 3.686±2.18 8.998±1.83 7.630±0.00
ENST00000551109 3.850±0.00 N/A N/A 17.142±0.00 21.911±0.00 N/A 0.486±0.00 N/A N/A 1.754±0.00 N/A N/A N/A N/A
ENST00000551771 N/A N/A 0.148±0.00 1.077±0.00 N/A N/A 0.113±0.00 N/A N/A 0.379±0.00 0.498±0.00 N/A N/A N/A
ENST00000551864 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552382 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.185±0.00 N/A 1.178±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000000552 ENSMUST00000168828 7.082±4.51 2.083±1.24 3.244±1.25 7.905±7.30 12.492±5.79 2.524±0.71 2.135±0.75 0.712±0.15 3.288±1.48 1.348±0.45 1.995±1.24 2.508±1.58 2.400±2.50 N/A
ENSMUSG00000000555 ENSMUST00000023128 16.292±5.94 14.276±0.84 53.156±10.07 1.797±0.77 8.834±1.81 22.205±2.56 11.804±1.60 2.614±0.88 8.274±1.32 13.043±1.78 1.853±0.49 18.560±5.15 48.649±21.19 0.256±0.19

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