C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 385A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000338010 ZNF385A-001 ENSG00000161642 9606 - 12:54369140-54391298 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverOvaryPlacentaTestisENST00000338010
Transcript ID Brain Heart Kidney Liver Ovary Placenta Testis
ENST00000338010 1.575±0.00 1.338±0.00 1.072±0.00 0.581±0.20 4.220±2.15 14.248±6.41 3.034±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000035 CIL_000035_0001 CGP 12:54362445-54391298
CIL_000031 CIL_000031_0001 CGP 12:54369133-54419460

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000790 IDA nuclear chromatin
GO:0002039 IPI p53 binding
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003730 ISS mRNA 3'-UTR binding
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006915 ISS apoptotic process
GO:0006974 ISS cellular response to DNA damage stimulus
GO:0007599 IEA hemostasis
GO:0007611 IEA learning or memory
GO:0007626 IEA locomotory behavior
GO:0008270 IEA zinc ion binding
GO:0008298 IEA intracellular mRNA localization
GO:0010609 ISS mRNA localization resulting in posttranscriptional regulation of gene expression
GO:0030220 IEA platelet formation
GO:0030425 ISS dendrite
GO:0035855 ISS megakaryocyte development
GO:0043025 ISS neuronal cell body
GO:0044822 IDA poly(A) RNA binding
GO:0045600 ISS positive regulation of fat cell differentiation
GO:0046872 IEA metal ion binding
GO:0070889 IEA platelet alpha granule organization
GO:1902164 IMP positive regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator
GO:1902166 IMP negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
GO:2000765 ISS regulation of cytoplasmic translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168828 Zfp385a-201 protein_coding Mus_musculus 0 3066

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