C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: synaptonemal complex central element protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000161860 SYCE2 9606 - 19:12898786-12919276 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000293695 SYCE2-001 12898786-12919276 protein_coding
  ENST00000591229 SYCE2-003 12904517-12906203 processed_transcript
  ENST00000592819 SYCE2-004 12899082-12900484 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainTestisENST00000293695ENST00000591229
Transcript ID Brain Testis
ENST00000293695 3.134±0.00 8.449±3.17
ENST00000591229 N/A 34.473±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VV CIL_0007VV_0001 VISTA 19:12752697-13356541
CIL_0007ZV CIL_0007ZV_0001 VISTA 19:12767682-13372012

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000801 ISS central element
GO:0005515 IEA protein binding
GO:0007130 IC synaptonemal complex assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058375 syce2 synaptonemal complex central element protein 2 protein_coding Danio_rerio
ENSMUSG00000003824 Syce2 synaptonemal complex central element protein 2 protein_coding Mus_musculus

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