C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000162227 TAF6L 9606 + 11:62771303-62787342 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000294168 TAF6L-001 62771303-62787342 protein_coding
  ENST00000524976 TAF6L-002 62771402-62782465 retained_intron
  ENST00000525405 TAF6L-005 62771367-62778894 nonsense_mediated_decay
  ENST00000526261 TAF6L-004 62771357-62776387 protein_coding
  ENST00000529509 TAF6L-008 62772039-62778335 protein_coding
  ENST00000531265 TAF6L-006 62778687-62781941 retained_intron
  ENST00000532915 TAF6L-003 62771403-62778788 retained_intron
  ENST00000533823 TAF6L-007 62781726-62782333 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainHeartKidneyLungMuscleOvaryPlacentaTestisENST00000294168
Transcript ID Adipose Adrenal Brain Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000294168 3.776±0.00 9.563±0.00 4.220±0.00 3.742±0.00 5.913±4.36 0.792±0.00 5.593±0.00 6.220±3.80 6.113±0.98 4.288±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089X CIL_00089X_0001 VISTA 11:62298635-62900076

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000118 TAS histone deacetylase complex
GO:0003677 TAS DNA binding
GO:0003713 IDA transcription coactivator activity
GO:0004402 IDA histone acetyltransferase activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0006325 TAS chromatin organization
GO:0006338 TAS chromatin remodeling
GO:0006352 IEA DNA-templated transcription, initiation
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0030914 IDA STAGA complex
GO:0043966 IDA histone H3 acetylation
GO:0046982 IEA protein heterodimerization activity
GO:0051090 IEA regulation of sequence-specific DNA binding transcription factor activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079684 taf6l TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor protein_coding Danio_rerio
ENSMUSG00000003680 Taf6l TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor protein_coding Mus_musculus

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